RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ELMSAN1Q6PJG2 1045 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 ADGRF2Q8IZF7 708 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 RTP3Q9BQQ7 232 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 DZANK1Q9NVP4 752 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 CLDND1Q9NY35 253 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 MAFFQ9ULX9 164 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 KCNJ18B7U540 433 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 TGM5O43548 720 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 ABLIM3O94929 683 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 WARSP23381 471 aaKnown RBP21.15■□□□□ 0.98
LIME1-205ENST00000480139 LTBRP36941 435 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 MTIF2P46199 727 aaKnown RBP21.15■□□□□ 0.98
LIME1-205ENST00000480139 NOP14P78316 857 aaKnown RBP21.15■□□□□ 0.98
LIME1-205ENST00000480139 ROR1Q01973 937 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 KCNJ12Q14500 433 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 NCAPHQ15003 741 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 SKIV2LQ15477 1246 aaKnown RBP21.15■□□□□ 0.98
LIME1-205ENST00000480139 MAN2A1Q16706 1144 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 TCP11X2Q5H9J9 407 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 TPGS2Q68CL5 300 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 ZNF461Q8TAF7 563 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 KBTBD7Q8WVZ9 684 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 SEMA4DQ92854 862 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 HLA-CQ95604 372 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 MMS19Q96T76 1030 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 PLEKHA4Q9H4M7 779 aa21.15■□□□□ 0.98
LIME1-205ENST00000480139 UBE2ZQ9H832 354 aaPredicted RBP21.15■□□□□ 0.98
LIME1-205ENST00000480139 NXF1Q9UBU9 619 aaKnown RBP21.15■□□□□ 0.98
LIME1-205ENST00000480139 TBX10O75333 385 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 EPCAMP16422 314 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 ZNF165P49910 485 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 RTL10Q7L3V2 364 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 PALB2Q86YC2 1186 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 GLYCTKQ8IVS8 523 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 OR10T2Q8NGX3 314 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 ACBD6Q9BR61 282 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 PI4K2AQ9BTU6 479 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 BCO2Q9BYV7 579 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 NIF3L1Q9GZT8 377 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 ZCWPW1Q9H0M4 648 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 FAM124BQ9H5Z6 455 aaPredicted RBP21.14■□□□□ 0.97
LIME1-205ENST00000480139 FANCLQ9NW38 375 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 DDX43Q9NXZ2 648 aaKnown RBP21.14■□□□□ 0.97
LIME1-205ENST00000480139 FBXW11Q9UKB1 542 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 EYSQ5T1H1 3165 aa21.14■□□□□ 0.97
LIME1-205ENST00000480139 BRWD1Q9NSI6 2320 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 WDR27A2RRH5 827 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 SMTNL1A8MU46 457 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 CLSTN1O94985 981 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 HOXB8P17481 243 aaPredicted RBP21.13■□□□□ 0.97
LIME1-205ENST00000480139 PCSK1P29120 753 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 ASPAP45381 313 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 RBM10P98175 930 aaKnown RBP21.13■□□□□ 0.97
LIME1-205ENST00000480139 SMARCB1Q12824 385 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 GPR17Q13304 367 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 WDR44Q5JSH3 913 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 SPOPLQ6IQ16 392 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 LLGL2Q6P1M3 1020 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 CREBRFQ8IUR6 639 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 AOPEPQ8N6M6 819 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 TUBGCP2Q9BSJ2 902 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 APOBEC3GQ9HC16 384 aaKnown RBP21.13■□□□□ 0.97
LIME1-205ENST00000480139 CLEC1BQ9P126 229 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 POLIQ9UNA4 740 aa21.13■□□□□ 0.97
LIME1-205ENST00000480139 GTPBP10A4D1E9 387 aaKnown RBP21.12■□□□□ 0.97
LIME1-205ENST00000480139 PAPLNO95428 1278 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 CPB1P15086 417 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 ATF2P15336 505 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 ZNF18P17022 549 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 ANKRD54Q6NXT1 300 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 OSTM1Q86WC4 334 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 DHX40Q8IX18 779 aaKnown RBP21.12■□□□□ 0.97
LIME1-205ENST00000480139 MSLNLQ96KJ4 702 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 MRPL45Q9BRJ2 306 aaKnown RBP21.12■□□□□ 0.97
LIME1-205ENST00000480139 HSD3B7Q9H2F3 369 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 SMYD3Q9H7B4 428 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 CYP3A43Q9HB55 503 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 MAN1C1Q9NR34 630 aa21.12■□□□□ 0.97
LIME1-205ENST00000480139 AFF4Q9UHB7 1163 aaKnown RBP21.12■□□□□ 0.97
LIME1-205ENST00000480139 LRRN2O75325 713 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 TSPY1Q01534 308 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 DLX2Q07687 328 aaPredicted RBP21.11■□□□□ 0.97
LIME1-205ENST00000480139 UVSSAQ2YD98 709 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 VWA3BQ502W6 1294 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 HSP90AA4PQ58FG1 418 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 MIIPQ5JXC2 388 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 DCP1BQ8IZD4 617 aaKnown RBP21.11■□□□□ 0.97
LIME1-205ENST00000480139 KREMEN2Q8NCW0 462 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 LMO3Q8TAP4 145 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 C2orf15Q8WU43 125 aaKnown RBP21.11■□□□□ 0.97
LIME1-205ENST00000480139 SNX25Q9H3E2 840 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 NDST4Q9H3R1 872 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 SFXN1Q9H9B4 322 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 HSFX1Q9UBD0 423 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 CDH9Q9ULB4 789 aa21.11■□□□□ 0.97
LIME1-205ENST00000480139 BARX2Q9UMQ3 279 aaPredicted RBP21.11■□□□□ 0.97
LIME1-205ENST00000480139 COL6A3P12111 3177 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 GNL1P36915 607 aaPredicted RBP21.1■□□□□ 0.97
LIME1-205ENST00000480139 ARPP19P56211 112 aa21.1■□□□□ 0.97
LIME1-205ENST00000480139 INCA1Q0VD86 236 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms