RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 ACTR3P61158 418 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 SNRPFP62306 86 aaKnown RBP14.28□□□□□ -0.12
C9orf78-205ENST00000480023 PRKD1Q15139 912 aaPredicted RBP14.28□□□□□ -0.12
C9orf78-205ENST00000480023 RNASEH2BQ5TBB1 312 aaKnown RBP14.28□□□□□ -0.12
C9orf78-205ENST00000480023 ACAD11Q709F0 780 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 ADGRG6Q86SQ4 1221 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 SLC51AQ86UW1 340 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 ALLCQ8N6M5 410 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 CCDC110Q8TBZ0 833 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 SEMA4DQ92854 862 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 FNBP1Q96RU3 617 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 DDX50Q9BQ39 737 aaKnown RBP14.28□□□□□ -0.12
C9orf78-205ENST00000480023 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 PCIF1Q9H4Z3 704 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 GPAMQ9HCL2 828 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 HSPBP1Q9NZL4 362 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 RABGEF1Q9UJ41 708 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 CNTNAP4Q9C0A0 1308 aa14.28□□□□□ -0.12
C9orf78-205ENST00000480023 C6orf229H3BNL8 230 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 K7ENM7 598 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 ATP2A1O14983 1001 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 ZCCHC18P0CG32 403 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 PYGBP11216 843 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 GPX6P59796 221 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 ZBTB16Q05516 673 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 CDC16Q13042 620 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 PICALMQ13492 652 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 SEPT7Q16181 437 aaKnown RBP14.27□□□□□ -0.12
C9orf78-205ENST00000480023 EAPPQ56P03 285 aaPredicted RBP14.27□□□□□ -0.12
C9orf78-205ENST00000480023 ZBED8Q8IZ13 594 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 GLIS1Q8NBF1 620 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 OXNAD1Q96HP4 312 aaPredicted RBP14.27□□□□□ -0.12
C9orf78-205ENST00000480023 CCDC17Q96LX7 622 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 FAM118BQ9BPY3 351 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 FHDC1Q9C0D6 1143 aaPredicted RBP14.27□□□□□ -0.12
C9orf78-205ENST00000480023 OCEL1Q9H607 264 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 DDX4Q9NQI0 724 aaKnown RBP14.27□□□□□ -0.12
C9orf78-205ENST00000480023 NDE1Q9NXR1 346 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 WRAP73Q9P2S5 460 aaPredicted RBP14.27□□□□□ -0.12
C9orf78-205ENST00000480023 PLA2G4CQ9UP65 541 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 SH3BP1Q9Y3L3 701 aa14.27□□□□□ -0.12
C9orf78-205ENST00000480023 CAPN14A8MX76 684 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 FCHO1O14526 889 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 IMPDH2P12268 514 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 ZNF76P36508 570 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 AP2B1P63010 937 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 LRRC6Q86X45 466 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 FBXO11Q86XK2 927 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 ST13P4Q8IZP2 240 aaPredicted RBP14.27□□□□□ -0.13
C9orf78-205ENST00000480023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.27□□□□□ -0.13
C9orf78-205ENST00000480023 GPR101Q96P66 508 aaPredicted RBP14.27□□□□□ -0.13
C9orf78-205ENST00000480023 ACCSQ96QU6 501 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 WDR18Q9BV38 432 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 EPB41L1Q9H4G0 881 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 DRG1Q9Y295 367 aaKnown RBP14.27□□□□□ -0.13
C9orf78-205ENST00000480023 CLUHO75153 1309 aa14.27□□□□□ -0.13
C9orf78-205ENST00000480023 TISP43B9A030 160 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 KLF11O14901 512 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 TM7SF2O76062 418 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 ETV4P43268 484 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 ARSEP51690 589 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 TAS2R40P59535 323 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 GRM2Q14416 872 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 TMCO4Q5TGY1 634 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 KRT39Q6A163 491 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 RBM12BQ8IXT5 1001 aaKnown RBP14.26□□□□□ -0.13
C9orf78-205ENST00000480023 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.26□□□□□ -0.13
C9orf78-205ENST00000480023 FAM161BQ96MY7 647 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 NT5C1BQ96P26 610 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 ACSS3Q9H6R3 686 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 C17orf75Q9HAS0 396 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 SLC17A7Q9P2U7 560 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 MYPNQ86TC9 1320 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 WDR91A4D1P6 747 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 BUD23O43709 281 aaKnown RBP14.26□□□□□ -0.13
C9orf78-205ENST00000480023 RNASEH1O60930 286 aaKnown RBP14.26□□□□□ -0.13
C9orf78-205ENST00000480023 PHBP35232 272 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 MAP3K10Q02779 954 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 PDIA2Q13087 525 aaKnown RBP14.26□□□□□ -0.13
C9orf78-205ENST00000480023 GPS1Q13098 491 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 MYBPC3Q14896 1274 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 KLHL38Q2WGJ6 581 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 C6orf163Q5TEZ5 329 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 SLFN13Q68D06 897 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 RIPOR1Q6ZS17 1223 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 TTC7BQ86TV6 843 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 ZNF677Q86XU0 584 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 SCUBE1Q8IWY4 988 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 NME8Q8N427 588 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 CCDC24Q8N4L8 307 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 PANX3Q96QZ0 392 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 LBHD1Q9BQE6 289 aaPredicted RBP14.26□□□□□ -0.13
C9orf78-205ENST00000480023 ST6GALNAC4Q9H4F1 302 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 NYAP2Q9P242 653 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 DNPEPQ9ULA0 475 aa14.26□□□□□ -0.13
C9orf78-205ENST00000480023 SMIM31A0A1B0GVY4 71 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 DENND3A2RUS2 1198 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 ADRB2P07550 413 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 ARL4CP56559 192 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 DDB1Q16531 1140 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms