RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 B3GNTL1Q67FW5 361 aaPredicted RBP6.84□□□□□ -1.32
COMMD3-212ENST00000479958 TBC1D15Q8TC07 691 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 MARS2Q96GW9 593 aaKnown RBP6.84□□□□□ -1.32
COMMD3-212ENST00000479958 CCDC8Q9H0W5 538 aaPredicted RBP6.84□□□□□ -1.32
COMMD3-212ENST00000479958 PANK3Q9H999 370 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 MAN1C1Q9NR34 630 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 TUBD1Q9UJT1 453 aa6.84□□□□□ -1.32
COMMD3-212ENST00000479958 EPN1Q9Y6I3 576 aaPredicted RBP6.84□□□□□ -1.32
COMMD3-212ENST00000479958 PTPRMP28827 1452 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 CENPJQ9HC77 1338 aaPredicted RBP6.83□□□□□ -1.32
COMMD3-212ENST00000479958 MYADML2A6NDP7 307 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 KATNA1O75449 491 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 ESRRBO95718 433 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 SEC24CP53992 1094 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 KIF23Q02241 960 aaPredicted RBP6.83□□□□□ -1.32
COMMD3-212ENST00000479958 MPP3Q13368 585 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 RAB39AQ14964 217 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 PABPC1LQ4VXU2 614 aaKnown RBP6.83□□□□□ -1.32
COMMD3-212ENST00000479958 STRIP1Q5VSL9 837 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 OLFML1Q6UWY5 402 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 GADL1Q6ZQY3 521 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 AOPEPQ8N6M6 819 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 ASB10Q8WXI3 467 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.83□□□□□ -1.32
COMMD3-212ENST00000479958 DMTF1Q9Y222 760 aa6.83□□□□□ -1.32
COMMD3-212ENST00000479958 C3P01024 1663 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 SETBP1Q9Y6X0 1596 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 AATKQ6ZMQ8 1374 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 FER1L4A9Z1Z3 1794 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 GABRDO14764 452 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PCDHGA12O60330 932 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 HAUS5O94927 633 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PRSS23O95084 383 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 FDXRP22570 491 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 ADRA1BP35368 520 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 COL10A1Q03692 680 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PCBP2Q15366 365 aaKnown RBP eCLIP6.82□□□□□ -1.32
COMMD3-212ENST00000479958 FUBP1Q96AE4 644 aaKnown RBP6.82□□□□□ -1.32
COMMD3-212ENST00000479958 COA7Q96BR5 231 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 TEKT5Q96M29 485 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 CALCOCO1Q9P1Z2 691 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PCDHGA9Q9Y5G4 932 aaKnown RBP6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PCDHGA8Q9Y5G5 932 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PCDHGA7Q9Y5G6 932 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PCDHGA6Q9Y5G7 932 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 PCDHGA3Q9Y5H0 932 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 ALKQ9UM73 1620 aa6.82□□□□□ -1.32
COMMD3-212ENST00000479958 CDHR4A6H8M9 788 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 CCDC154A6NI56 674 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 ZAR1LA6NP61 321 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 HTRA2O43464 458 aaPredicted RBP6.81□□□□□ -1.32
COMMD3-212ENST00000479958 PTPN21Q16825 1174 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 GPR149Q86SP6 731 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 TTC7BQ86TV6 843 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 IL17RDQ8NFM7 739 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 CLPTM1LQ96KA5 538 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 SLC13A1Q9BZW2 595 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 CASS4Q9NQ75 786 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 USP25Q9UHP3 1055 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 IPPQ9Y573 584 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 UBR1Q8IWV7 1749 aa6.81□□□□□ -1.32
COMMD3-212ENST00000479958 METP08581 1390 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 EIF3AQ14152 1382 aaKnown RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 TMEM2Q9UHN6 1383 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 PLEKHH1Q9ULM0 1364 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 NRXN3Q9Y4C0 1643 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 MAST3O60307 1309 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 GRM6O15303 877 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 IBSPP21815 317 aaPredicted RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 CXCR5P32302 372 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 ADKP55263 362 aaKnown RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 EVA1CP58658 441 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 NOMO3P69849 1222 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 TARDBPQ13148 414 aaKnown RBP eCLIP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 CYP2A13Q16696 494 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 NOMO2Q5JPE7 1267 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 CC2D1BQ5T0F9 858 aaKnown RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 UTP14CQ5TAP6 766 aaKnown RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 PTCD3Q96EY7 689 aaKnown RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 Q96MF0 132 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 PRAM1Q96QH2 718 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 PACSIN1Q9BY11 444 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 PCDH12Q9NPG4 1184 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 LIMCH1Q9UPQ0 1083 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 COL4A3BPQ9Y5P4 624 aa6.8□□□□□ -1.32
COMMD3-212ENST00000479958 RIMS1Q86UR5 1692 aaKnown RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 YTHDC2Q9H6S0 1430 aaKnown RBP6.8□□□□□ -1.32
COMMD3-212ENST00000479958 ARHGEF28Q8N1W1 1705 aaKnown RBP6.79□□□□□ -1.32
COMMD3-212ENST00000479958 IL10RAQ13651 578 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 UAP1L1Q3KQV9 507 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 MIER2Q8N344 545 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 CAGE1Q8TC20 777 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 IFI44Q8TCB0 444 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 SLC12A5Q9H2X9 1139 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 NEU2Q9Y3R4 380 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 CFAP20Q9Y6A4 193 aaKnown RBP6.79□□□□□ -1.32
COMMD3-212ENST00000479958 QRICH2Q9H0J4 1663 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 MYO3AQ8NEV4 1616 aa6.79□□□□□ -1.32
COMMD3-212ENST00000479958 SETD1AO15047 1707 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms