RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TMLHEQ9NVH6 421 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 PROB1E7EW31 1015 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 ITGB3P05106 788 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 ALDH1A3P47895 512 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 EPHB3P54753 998 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 MGAT5BQ3V5L5 792 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 SDHAF4Q5VUM1 108 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 FAM200AQ8TCP9 573 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 NKD2Q969F2 451 aaPredicted RBP18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 HVCN1Q96D96 273 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 BORCS6Q96GS4 357 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 PDE11AQ9HCR9 933 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 SPATA6Q9NWH7 488 aaPredicted RBP18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 ABI2Q9NYB9 513 aaPredicted RBP18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 RBAKQ9NYW8 714 aaPredicted RBP18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 SEL1LQ9UBV2 794 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 AGAP1Q9UPQ3 857 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 DERAQ9Y315 318 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 C2CD2Q9Y426 696 aa18.78■□□□□ 0.6
ECHDC1-216ENST00000479525 FRMD3A2A2Y4 597 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 HEPACAM2A8MVW5 462 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 SP9P0CG40 484 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 ATF6P18850 670 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 ACAT1P24752 427 aaKnown RBP18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 EPHA5P54756 1037 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 BFSP1Q12934 665 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 PLD1Q13393 1074 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 MYBPC2Q14324 1141 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 SHC4Q6S5L8 630 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 TSSK4Q6SA08 328 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 GAREM2Q75VX8 874 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 C1orf210Q8IVY1 113 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 BRSK2Q8IWQ3 736 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 MAML2Q8IZL2 1156 aaPredicted RBP18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 C1orf127Q8N9H9 656 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 SMARCD2Q92925 531 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 SHDQ96IW2 340 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 ZFYVE19Q96K21 471 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 DDX23Q9BUQ8 820 aaKnown RBP18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 ZCWPW1Q9H0M4 648 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 SMG9Q9H0W8 520 aaKnown RBP18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 ATXN3LQ9H3M9 355 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 EXOC7Q9UPT5 735 aa18.77■□□□□ 0.6
ECHDC1-216ENST00000479525 PTPRJQ12913 1337 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 CYP11A1P05108 521 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 KRT19P08727 400 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 SCP2P22307 547 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 GABRR2P28476 465 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 SOX9P48436 509 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 ASIC1P78348 528 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 PFKPQ01813 784 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 PRKCQQ04759 706 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 E2F4Q16254 413 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 DNAJB7Q7Z6W7 309 aaPredicted RBP18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 OSTM1Q86WC4 334 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 METTL23Q86XA0 190 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 GRAMD1CQ8IYS0 662 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 ADSSL1Q8N142 457 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 KCNG4Q8TDN1 519 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 TRMT61BQ9BVS5 477 aaKnown RBP18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 MTMR12Q9C0I1 747 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 OLFML3Q9NRN5 406 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 PCDHB13Q9Y5F0 798 aa18.76■□□□□ 0.59
ECHDC1-216ENST00000479525 ATG2BQ96BY7 2078 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 KPNA7A9QM74 516 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 IL18RAPO95256 599 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 ABCD1P33897 745 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 HOXD13P35453 343 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 POSTNQ15063 836 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 CCDC65Q8IXS2 484 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 LRRC3BQ96PB8 259 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 PI4K2AQ9BTU6 479 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 MKNK1Q9BUB5 465 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 L1RE1Q9UN81 338 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 FRYLO94915 3013 aa18.75■□□□□ 0.59
ECHDC1-216ENST00000479525 GREB1Q4ZG55 1949 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 WDR87Q6ZQQ6 2873 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 HSP90AA1P07900 732 aaKnown RBP18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 PSMC3P17980 439 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 SV2CQ496J9 727 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 CBWD2Q8IUF1 395 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 NELFCDQ8IXH7 590 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 CSGALNACT2Q8N6G5 542 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 RDH13Q8NBN7 331 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 OR5B17Q8NGF7 314 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 PSMG2Q969U7 264 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 ZNF560Q96MR9 790 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 ZNF396Q96N95 335 aaPredicted RBP18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 TSPAN18Q96SJ8 248 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 BCO2Q9BYV7 579 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 SIX4Q9UIU6 781 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 ANAPC1Q9H1A4 1944 aa18.74■□□□□ 0.59
ECHDC1-216ENST00000479525 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 CLIC2O15247 247 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 EXTL3O43909 919 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 PRAMEF12O95522 483 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms