RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 GADD45BO75293 160 aaPredicted RBP22.28■■□□□ 1.16
PKP4-209ENST00000479398 LAMP2P13473 410 aa22.28■■□□□ 1.16
PKP4-209ENST00000479398 CASP4P49662 377 aa22.28■■□□□ 1.16
PKP4-209ENST00000479398 NFIL3Q16649 462 aa22.28■■□□□ 1.16
PKP4-209ENST00000479398 PABPC1LQ4VXU2 614 aaKnown RBP22.28■■□□□ 1.16
PKP4-209ENST00000479398 PARD3BQ8TEW8 1205 aa22.28■■□□□ 1.16
PKP4-209ENST00000479398 L1RE1Q9UN81 338 aa22.28■■□□□ 1.16
PKP4-209ENST00000479398 PCDHA5Q9Y5H7 936 aa22.28■■□□□ 1.16
PKP4-209ENST00000479398 ZFP37Q9Y6Q3 630 aaPredicted RBP22.28■■□□□ 1.16
PKP4-209ENST00000479398 TSC2P49815 1807 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 MTMR11A4FU01 709 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 SMC2O95347 1197 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 RHOP08100 348 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 CLDN10P78369 228 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 TWF1Q12792 350 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 TRIM67Q6ZTA4 783 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 DPH6Q7L8W6 267 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 LRRTM3Q86VH5 581 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 TMEM86AQ8N2M4 240 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 TOP6BLQ8N6T0 577 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 ATAD1Q8NBU5 361 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 SPATA20Q8TB22 786 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 ITFG1Q8TB96 612 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 PLEKHO2Q8TD55 490 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 ZNF512Q96ME7 567 aaPredicted RBP22.27■■□□□ 1.16
PKP4-209ENST00000479398 CRISPLD1Q9H336 500 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 KCNK12Q9HB15 430 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 AVENQ9NQS1 362 aaPredicted RBP22.27■■□□□ 1.16
PKP4-209ENST00000479398 IGSF9Q9P2J2 1179 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 HSFX1Q9UBD0 423 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 CDH7Q9ULB5 785 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 SLC27A5Q9Y2P5 690 aa22.27■■□□□ 1.16
PKP4-209ENST00000479398 PRR33A8MZF0 331 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 AP3M2P53677 418 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 SMARCB1Q12824 385 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 SOWAHAQ2M3V2 549 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 SLC39A12Q504Y0 691 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 ZNF658Q5TYW1 1059 aaPredicted RBP22.26■■□□□ 1.15
PKP4-209ENST00000479398 CEP135Q66GS9 1140 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 UBALD2Q8IYN6 164 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 ELMOD1Q8N336 334 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 SPATA18Q8TC71 538 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 ERCC4Q92889 916 aaPredicted RBP22.26■■□□□ 1.15
PKP4-209ENST00000479398 SMARCE1Q969G3 411 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 DDX43Q9NXZ2 648 aaKnown RBP22.26■■□□□ 1.15
PKP4-209ENST00000479398 CEP72Q9P209 647 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 FRMD4BQ9Y2L6 1034 aa22.26■■□□□ 1.15
PKP4-209ENST00000479398 RPL13P26373 211 aaKnown RBP22.25■■□□□ 1.15
PKP4-209ENST00000479398 LHX1P48742 406 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 SIGLEC14Q08ET2 396 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 TDGQ13569 410 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 MTMR3Q13615 1198 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 IQCEQ6IPM2 695 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 LIMS2Q7Z4I7 341 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 SMYD4Q8IYR2 804 aaPredicted RBP22.25■■□□□ 1.15
PKP4-209ENST00000479398 DCP1BQ8IZD4 617 aaKnown RBP22.25■■□□□ 1.15
PKP4-209ENST00000479398 TMC2Q8TDI7 906 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 FGF13Q92913 245 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 NXPE3Q969Y0 559 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 ACBD6Q9BR61 282 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 CORO1BQ9BR76 489 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 MRPS23Q9Y3D9 190 aaKnown RBP22.25■■□□□ 1.15
PKP4-209ENST00000479398 YIPF1Q9Y548 306 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 TECTAO75443 2155 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 TRIOO75962 3097 aa22.25■■□□□ 1.15
PKP4-209ENST00000479398 LRRIQ3A6PVS8 624 aaPredicted RBP22.24■■□□□ 1.15
PKP4-209ENST00000479398 GABRDO14764 452 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 MAPK13O15264 365 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 KINO60870 393 aaKnown RBP22.24■■□□□ 1.15
PKP4-209ENST00000479398 PHACTR2O75167 634 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 C4BPAP04003 597 aaKnown RBP22.24■■□□□ 1.15
PKP4-209ENST00000479398 NR2F2P24468 414 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 PRCPP42785 496 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 ALDH1A3P47895 512 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 TUFMP49411 452 aaKnown RBP22.24■■□□□ 1.15
PKP4-209ENST00000479398 EPHB3P54753 998 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 MYL7Q01449 175 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 PLD1Q13393 1074 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 ADAM9Q13443 819 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 TRPC3Q13507 836 aa22.24■■□□□ 1.15
PKP4-209ENST00000479398 C2orf15Q8WU43 125 aaKnown RBP22.24■■□□□ 1.15
PKP4-209ENST00000479398 GTPBP4Q9BZE4 634 aaKnown RBP22.24■■□□□ 1.15
PKP4-209ENST00000479398 TMEM221A6NGB7 291 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 ANHXE9PGG2 379 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 M0R296 226 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 ZNF197O14709 1029 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 DLG4P78352 724 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 TSPY1Q01534 308 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 SLC5A9Q2M3M2 681 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 ZCWPW2Q504Y3 356 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 COBLL1Q53SF7 1204 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 CYP4A22Q5TCH4 519 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 OSTM1Q86WC4 334 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 ADGRF2Q8IZF7 708 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 HS6ST3Q8IZP7 471 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 TTC9BQ8N6N2 239 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 RSAD2Q8WXG1 361 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 MMS19Q96T76 1030 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 SMOC2Q9H3U7 446 aa22.23■■□□□ 1.15
PKP4-209ENST00000479398 IKBKBO14920 756 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms