RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 MYL5Q02045 173 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 SMAD2Q15796 467 aaKnown RBP16.32■□□□□ 0.2
COL16A1-211ENST00000479100 ZNF667Q5HYK9 610 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 SCARA5Q6ZMJ2 495 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 GPR65Q8IYL9 337 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 THEM5Q8N1Q8 247 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 EFHBQ8N7U6 833 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 MSLNLQ96KJ4 702 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 CLSTN3Q9BQT9 956 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 PI4K2AQ9BTU6 479 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 IMPG2Q9BZV3 1241 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 PRKAG3Q9UGI9 489 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 FBXL5Q9UKA1 691 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 POLIQ9UNA4 740 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 BACE2Q9Y5Z0 518 aa16.32■□□□□ 0.2
COL16A1-211ENST00000479100 ATG2AQ2TAZ0 1938 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 KCNJ18B7U540 433 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
COL16A1-211ENST00000479100 MBTPS2O43462 519 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 AFPP02771 609 aaKnown RBP16.31■□□□□ 0.2
COL16A1-211ENST00000479100 CYP11A1P05108 521 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 SPATA31D3P0C874 917 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 FMO5P49326 533 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
COL16A1-211ENST00000479100 MRPL58Q14197 206 aaKnown RBP16.31■□□□□ 0.2
COL16A1-211ENST00000479100 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 TMEM31Q5JXX7 168 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 RSPO2Q6UXX9 243 aaPredicted RBP16.31■□□□□ 0.2
COL16A1-211ENST00000479100 SPATA31D4Q6ZUB0 917 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 ADGRF2Q8IZF7 708 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 TOP6BLQ8N6T0 577 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 FBXL13Q8NEE6 735 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 TAF4BQ92750 862 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 FUCA2Q9BTY2 467 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 XYLT2Q9H1B5 865 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 FANCLQ9NW38 375 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 RAB20Q9NX57 234 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 VWA8A3KMH1 1905 aa16.31■□□□□ 0.2
COL16A1-211ENST00000479100 C5orf42Q9H799 3197 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 N4BP1O75113 896 aaKnown RBP16.3■□□□□ 0.2
COL16A1-211ENST00000479100 OAZ2O95190 189 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 STAU1O95793 577 aaKnown RBP16.3■□□□□ 0.2
COL16A1-211ENST00000479100 GLUD1P00367 558 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 ASS1P00966 412 aaKnown RBP16.3■□□□□ 0.2
COL16A1-211ENST00000479100 SRGAP2BP0DMP2 458 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 P4HA1P13674 534 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
COL16A1-211ENST00000479100 CPB1P15086 417 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 EPCAMP16422 314 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 ZNF165P49910 485 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 CETN1Q12798 172 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 WDR44Q5JSH3 913 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 ADHFE1Q8IWW8 467 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 TMEM86AQ8N2M4 240 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 SLC22A17Q8WUG5 538 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 SEMA4DQ92854 862 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 SNX25Q9H3E2 840 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 FAM50BQ9Y247 325 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 HCFC2Q9Y5Z7 792 aa16.3■□□□□ 0.2
COL16A1-211ENST00000479100 FSD2A1L4K1 749 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 OR6C75A6NL08 312 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 SMTNL1A8MU46 457 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 BECN2A8MW95 431 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 TGM5O43548 720 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 LRRN2O75325 713 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 GLP2RO95838 553 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 OR4Q2P0C623 313 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
COL16A1-211ENST00000479100 SSTR3P32745 418 aaPredicted RBP16.29■□□□□ 0.2
COL16A1-211ENST00000479100 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 CLCN4P51793 760 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
COL16A1-211ENST00000479100 LRMPQ12912 555 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 SMAD4Q13485 552 aaKnown RBP16.29■□□□□ 0.2
COL16A1-211ENST00000479100 RAB33AQ14088 237 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 CLUL1Q15846 466 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 DPH6Q7L8W6 267 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 OSTM1Q86WC4 334 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 VN1R2Q8NFZ6 395 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 OR6B3Q8NGW1 331 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 CASP10Q92851 521 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 MRPL45Q9BRJ2 306 aaKnown RBP16.29■□□□□ 0.2
COL16A1-211ENST00000479100 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 SMYD3Q9H7B4 428 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
COL16A1-211ENST00000479100 BARX2Q9UMQ3 279 aaPredicted RBP16.29■□□□□ 0.2
COL16A1-211ENST00000479100 FAM86C2PA6NEL3 165 aa16.28■□□□□ 0.2
COL16A1-211ENST00000479100 TBC1D4O60343 1298 aa16.28■□□□□ 0.2
COL16A1-211ENST00000479100 PDGFRBP09619 1106 aa16.28■□□□□ 0.2
COL16A1-211ENST00000479100 ACAT1P24752 427 aaKnown RBP16.28■□□□□ 0.2
COL16A1-211ENST00000479100 EEF1GP26641 437 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms