RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	AGT	P01019	485 aa		29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	MAN1A1	P33908	653 aa		29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	FLT3LG	P49771	235 aa		29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	ZNF568	Q3ZCX4	644 aa		29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	IER5	Q5VY09	327 aa		29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	SYDE1	Q6ZW31	735 aa	Predicted RBP	29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	APOBEC3G	Q9HC16	384 aa	Known RBP	29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	RBAK	Q9NYW8	714 aa	Predicted RBP	29.2	■■■□□ 2.27
CHKB-208	ENST00000479003	TLDC2	A0PJX2	215 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003		A6NJR5	290 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003		K7ERI5	159 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	GAS2	O43903	313 aa	Known RBP	29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	GJB1	P08034	283 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	CLCN3	P51790	818 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	PRKCZ	Q05513	592 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	ERMARD	Q5T6L9	678 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	MDM1	Q8TC05	714 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	TRIB2	Q92519	343 aa		29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	ZBTB45	Q96K62	511 aa	Predicted RBP	29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	DDX20	Q9UHI6	824 aa	Known RBP	29.2	■■■□□ 2.26
CHKB-208	ENST00000479003	TP73	O15350	636 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	PROSC	O94903	275 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	LAMTOR4	Q0VGL1	99 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	EXOC8	Q8IYI6	725 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	TCP11	Q8WWU5	503 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	XPO6	Q96QU8	1125 aa	Known RBP	29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	CGRRF1	Q99675	332 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	CHST7	Q9NS84	486 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	EVPL	Q92817	2033 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	UMODL1	Q5DID0	1318 aa		29.19	■■■□□ 2.26
CHKB-208	ENST00000479003	LLGL1	Q15334	1064 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	QPCT	Q16769	361 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	TNFAIP8L3	Q5GJ75	292 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	ZNF484	Q5JVG2	852 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	LIN9	Q5TKA1	542 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	EFCAB12	Q6NXP0	572 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	TRMT10C	Q7L0Y3	403 aa	Known RBP	29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	HERPUD2	Q9BSE4	406 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	CNTN6	Q9UQ52	1028 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003		A0A0B4J269	797 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	NOMO3	P69849	1222 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	HTRA3	P83110	453 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	PTK6	Q13882	451 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	LLGL2	Q6P1M3	1020 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	RHBDF2	Q6PJF5	856 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	PHLDB2	Q86SQ0	1253 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	TRPV1	Q8NER1	839 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	VCPIP1	Q96JH7	1222 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	MSTO1	Q9BUK6	570 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	DCLK3	Q9C098	648 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	ADAM7	Q9H2U9	754 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	PCDHB4	Q9Y5E5	795 aa		29.18	■■■□□ 2.26
CHKB-208	ENST00000479003	ADCY3	O60266	1144 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	TRPA1	O75762	1119 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	FSBP	O95073	299 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	EDN1	P05305	212 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	ITIH2	P19823	946 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	SNX1	Q13596	522 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	RHPN2	Q8IUC4	686 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	GRK7	Q8WTQ7	553 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	JPH2	Q9BR39	696 aa	Predicted RBP	29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	TARS2	Q9BW92	718 aa	Known RBP	29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	YY1AP1	Q9H869	796 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	BRCA2	P51587	3418 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	CLTA	P09496	248 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	SRGAP2C	P0DJJ0	459 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	SP3	Q02447	781 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	C2CD6	Q53TS8	623 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	ZBTB41	Q5SVQ8	909 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	REM2	Q8IYK8	340 aa	Predicted RBP	29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	EPS8L3	Q8TE67	593 aa	Known RBP	29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	ZNF668	Q96K58	619 aa	Predicted RBP	29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	STMN4	Q9H169	189 aa	Predicted RBP	29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	TMEM134	Q9H6X4	195 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	AAAS	Q9NRG9	546 aa		29.17	■■■□□ 2.26
CHKB-208	ENST00000479003	CNTNAP2	Q9UHC6	1331 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	PSTPIP1	O43586	416 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	CFH	P08603	1231 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	CHN1	P15882	459 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	TBXAS1	P24557	533 aa	Predicted RBP	29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	IVD	P26440	423 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	GNA15	P30679	374 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	IFI35	P80217	286 aa	Predicted RBP	29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	IFT88	Q13099	833 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	MXD4	Q14582	209 aa	Predicted RBP	29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	TMEM270	Q6UE05	265 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	PHF13	Q86YI8	300 aa	Predicted RBP	29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	RNF149	Q8NC42	400 aa		29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	ROPN1B	Q9BZX4	212 aa	Predicted RBP	29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	ROPN1	Q9HAT0	212 aa	Predicted RBP	29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	MRPL47	Q9HD33	250 aa	Known RBP	29.16	■■■□□ 2.26
CHKB-208	ENST00000479003	SMIM23	A6NLE4	172 aa		29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	RASGRF2	O14827	1237 aa		29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	MFSD5	Q6N075	450 aa		29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	PPP1R2P3	Q6NXS1	205 aa		29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	UHMK1	Q8TAS1	419 aa	Known RBP	29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	ATG4A	Q8WYN0	398 aa		29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	SNF8	Q96H20	258 aa		29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	SEC16B	Q96JE7	1060 aa		29.15	■■■□□ 2.26
CHKB-208	ENST00000479003	C11orf70	Q9BRQ4	267 aa		29.15	■■■□□ 2.26

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms