RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 HEXIM2Q96MH2 286 aaKnown RBP4.39□□□□□ -1.71
USP25-208ENST00000478932 RPS6KC1Q96S38 1066 aa4.39□□□□□ -1.71
USP25-208ENST00000478932 HEMGNQ9BXL5 484 aa4.39□□□□□ -1.71
USP25-208ENST00000478932 GCOM2Q9BZD3 368 aaPredicted RBP4.39□□□□□ -1.71
USP25-208ENST00000478932 TRIM6Q9C030 488 aaPredicted RBP4.39□□□□□ -1.71
USP25-208ENST00000478932 ASB7Q9H672 318 aa4.39□□□□□ -1.71
USP25-208ENST00000478932 DPP3Q9NY33 737 aa4.39□□□□□ -1.71
USP25-208ENST00000478932 CYTH4Q9UIA0 394 aa4.39□□□□□ -1.71
USP25-208ENST00000478932 PIN4Q9Y237 131 aaKnown RBP4.39□□□□□ -1.71
USP25-208ENST00000478932 USTQ9Y2C2 406 aa4.39□□□□□ -1.71
USP25-208ENST00000478932 PCDHA3Q9Y5H8 950 aa4.39□□□□□ -1.71
USP25-208ENST00000478932 XIRP2A4UGR9 3374 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 CITO14578 2027 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 COL1A2P08123 1366 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 CHD7Q9P2D1 2997 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 MIF4GDA9UHW6 222 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 F8VP50 259 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TLR3O15455 904 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 CA12O43570 354 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 MTA2O94776 668 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 IL18RAPO95256 599 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ELNP15502 786 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 IBSPP21815 317 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 IGFBP6P24592 240 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 MCM3P25205 808 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 RFC1P35251 1148 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 GJC1P36383 396 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 PSEN2P49810 448 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 CPT1AP50416 773 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 AFF1P51825 1210 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 PTP4A2Q12974 167 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 NFX1Q12986 1120 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 SNX17Q15036 470 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TCEAL1Q15170 157 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 MAP9Q49MG5 647 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 FAM47CQ5HY64 1035 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SLC27A1Q6PCB7 646 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ZNF410Q86VK4 478 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SESTD1Q86VW0 696 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ERICH1Q86X53 443 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 PRELID2Q8N945 189 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SLC4A11Q8NBS3 891 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 UBA3Q8TBC4 463 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 WHAMMQ8TF30 809 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 AENQ8WTP8 325 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 ACSF2Q96CM8 615 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 CALR3Q96L12 384 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 APBA2Q99767 749 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 FAM118BQ9BPY3 351 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 HERPUD2Q9BSE4 406 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TRIM51Q9BSJ1 452 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 OSBPL7Q9BZF2 842 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ELOVL4Q9GZR5 314 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 DPH5Q9H2P9 285 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 GOLGA2P5Q9HBQ8 144 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 GPBP1L1Q9HC44 474 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 PTPN22Q9Y2R2 807 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SNX9Q9Y5X1 595 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ATP8B3O60423 1300 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 PASKQ96RG2 1323 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SZT2Q5T011 3432 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SMIM35A0A1B0GVV1 85 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 CCDC66A2RUB6 948 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 MEIS3P2A8K0S8 358 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 GOLGA8SH3BPF8 625 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 HAS3O00219 553 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 HCRTO43612 131 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 AOC2O75106 756 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 RECQL4O94761 1208 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 KRT14P02533 472 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 CTSHP09668 335 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 RARAP10276 462 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 AKR1A1P14550 325 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 OAS2P29728 719 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 CTNNA1P35221 906 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 FLT3P36888 993 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 GGCXP38435 758 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TM4SF4P48230 202 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 NDST1P52848 882 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 RWDD2BP57060 319 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TAS2R40P59535 323 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 POU5F1Q01860 360 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 PRKCZQ05513 592 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SNX1Q13596 522 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 NBPF20Q3BBV1 942 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ZFYVE27Q5T4F4 411 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 PLEKHA7Q6IQ23 1121 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 DENND1BQ6P3S1 775 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 DCUN1D2Q6PH85 259 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 MAATS1Q7Z4T9 603 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ANKS1BQ7Z6G8 1248 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 PHF13Q86YI8 300 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 UBR7Q8N806 425 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TSEN2Q8NCE0 465 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 TMEM35BQ8NCS4 154 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 C1orf54Q8WWF1 131 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 ATG4AQ8WYN0 398 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 WNT8BQ93098 351 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 MAGOHBQ96A72 148 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 ZFP42Q96MM3 310 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms