RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 HRGP04196 525 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 SNRPA1P09661 255 aaKnown RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 KCNC1P48547 511 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 HUNKP57058 714 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 ATP2C1P98194 919 aaPredicted RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 HGFACQ04756 655 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 CXCL9Q07325 125 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 TNIP1Q15025 636 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 RGMBQ6NW40 437 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 PDZD4Q76G19 769 aaPredicted RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 CTU1Q7Z7A3 348 aaKnown RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 PQLC1Q8N2U9 271 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 ANKRD53Q8N9V6 530 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 SUPT20HQ8NEM7 779 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 RABGGTAQ92696 567 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 RGMAQ96B86 450 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 TIFAQ96CG3 184 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 RBM17Q96I25 401 aaKnown RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 CDK5RAP3Q96JB5 506 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 TMX4Q9H1E5 349 aaPredicted RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 LANCL2Q9NS86 450 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 TMEM140Q9NV12 185 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 CALCOCO1Q9P1Z2 691 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 DDX20Q9UHI6 824 aaKnown RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 PUF60Q9UHX1 559 aaKnown RBP7.1□□□□□ -1.27
SSR3-207ENST00000478842 KNSTRNQ9Y448 316 aa7.1□□□□□ -1.27
SSR3-207ENST00000478842 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
SSR3-207ENST00000478842 ERVV-1B6SEH8 477 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 PPIP5K2O43314 1243 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 B3GALT2O43825 422 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 ITGA10O75578 1167 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 TUSC2O75896 110 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 UBXN7O94888 489 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 ZBED1O96006 694 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 SREBF1P36956 1147 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 SLC6A9P48067 706 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 GMPSP49915 693 aaPredicted RBP7.09□□□□□ -1.27
SSR3-207ENST00000478842 DSC2Q02487 901 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 RAB39AQ14964 217 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 XP32Q5T750 250 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 PPP4R4Q6NUP7 873 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 RSPH3Q86UC2 560 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 SP8Q8IXZ3 490 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 OR14K1Q8NGZ2 314 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 KAT5Q92993 513 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 FAM167AQ96KS9 214 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 CDC5LQ99459 802 aaKnown RBP7.09□□□□□ -1.27
SSR3-207ENST00000478842 POLR3GLQ9BT43 218 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 SENP6Q9GZR1 1112 aaPredicted RBP7.09□□□□□ -1.27
SSR3-207ENST00000478842 RNF186Q9NXI6 227 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 PCDHB1Q9Y5F3 818 aa7.09□□□□□ -1.27
SSR3-207ENST00000478842 POLR2AP24928 1970 aaKnown RBP7.09□□□□□ -1.27
SSR3-207ENST00000478842 TEX33O43247 280 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 SLC26A4O43511 780 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 NOBOXO60393 691 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 FTLP02792 175 aaPredicted RBP7.08□□□□□ -1.28
SSR3-207ENST00000478842 ALDH2P05091 517 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 FXR1P51114 621 aaKnown RBP eCLIP7.08□□□□□ -1.28
SSR3-207ENST00000478842 HLFQ16534 295 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 VMACQ2NL98 169 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 ANO6Q4KMQ2 910 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 CCDC157Q569K6 752 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 OVCH2Q7RTZ1 564 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 C11orf96Q7Z7L8 435 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 CMTM4Q8IZR5 234 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 LGI4Q8N135 537 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 C3orf20Q8ND61 904 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 PJA1Q8NG27 643 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 CASKIN2Q8WXE0 1202 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 MTFMTQ96DP5 389 aaKnown RBP7.08□□□□□ -1.28
SSR3-207ENST00000478842 CLPTM1LQ96KA5 538 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 TOX2Q96NM4 488 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 CGRRF1Q99675 332 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 PDCD2LQ9BRP1 358 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 ZNF700Q9H0M5 742 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 MOCS1Q9NZB8 636 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 SIK3Q9Y2K2 1263 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 STXBP5LQ9Y2K9 1186 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 ATP6V0A2Q9Y487 856 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 LAMB4A4D0S4 1761 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 ANKRD36CQ5JPF3 1778 aa7.08□□□□□ -1.28
SSR3-207ENST00000478842 KCNQ3O43525 872 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 B4GALT4O60513 344 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 BBOX1O75936 387 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 NBPF7P0C2Y1 421 aaPredicted RBP7.07□□□□□ -1.28
SSR3-207ENST00000478842 HTR1BP28222 390 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 TXKP42681 527 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 PIP4K2AP48426 406 aaPredicted RBP7.07□□□□□ -1.28
SSR3-207ENST00000478842 USP14P54578 494 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 RAC3P60763 192 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 UBE4AQ14139 1066 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 SURF1Q15526 300 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 TBR1Q16650 682 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 ATP2B3Q16720 1220 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 RNF151Q2KHN1 245 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 DAAM2Q86T65 1068 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 LILRA3Q8N6C8 439 aaPredicted RBP7.07□□□□□ -1.28
SSR3-207ENST00000478842 PPP1R35Q8TAP8 253 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 CCHCR1Q8TD31 782 aa7.07□□□□□ -1.28
SSR3-207ENST00000478842 RPL10LQ96L21 214 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms