RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	MUT	P22033	750 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	RUNX3	Q13761	415 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	SLC10A6	Q3KNW5	377 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	USP37	Q86T82	979 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	ITIH5	Q86UX2	942 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	HHIP	Q96QV1	700 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	FAM83C	Q9BQN1	747 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	TMEM9B	Q9NQ34	198 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	HPS4	Q9NQG7	708 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.54	□□□□□ -0.56
APTX-222	ENST00000478279	LHX6	Q9UPM6	363 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	FREM2	Q5SZK8	3169 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	FLNB	O75369	2602 aa	Known RBP	11.54	□□□□□ -0.56
APTX-222	ENST00000478279	GON4L	Q3T8J9	2241 aa		11.54	□□□□□ -0.56
APTX-222	ENST00000478279	MTMR11	A4FU01	709 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	CCDC169	A6NNP5	214 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	DCLK1	O15075	740 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	EGF	P01133	1207 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	HARS	P12081	509 aa	Known RBP	11.53	□□□□□ -0.56
APTX-222	ENST00000478279	FDPS	P14324	419 aa	Known RBP	11.53	□□□□□ -0.56
APTX-222	ENST00000478279	DRD1	P21728	446 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	LRPAP1	P30533	357 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	NPTX2	P47972	431 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	PEX3	P56589	373 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	CYP4F8	P98187	520 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	AMPD2	Q01433	879 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	RING1	Q06587	406 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	MYBPC2	Q14324	1141 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	MPZL3	Q6UWV2	235 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	TAS1R3	Q7RTX0	852 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	DIS3L2	Q8IYB7	885 aa	Known RBP	11.53	□□□□□ -0.56
APTX-222	ENST00000478279	ATAD1	Q8NBU5	361 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.53	□□□□□ -0.56
APTX-222	ENST00000478279	CHFR	Q96EP1	664 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	BHMT2	Q9H2M3	363 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.53	□□□□□ -0.56
APTX-222	ENST00000478279	HSFX1	Q9UBD0	423 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	TUBGCP4	Q9UGJ1	667 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	EBF1	Q9UH73	591 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	ZMYM5	Q9UJ78	669 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	RBM19	Q9Y4C8	960 aa	Known RBP	11.53	□□□□□ -0.56
APTX-222	ENST00000478279	IGSF10	Q6WRI0	2623 aa		11.53	□□□□□ -0.56
APTX-222	ENST00000478279	THADA	Q6YHU6	1953 aa		11.52	□□□□□ -0.56
APTX-222	ENST00000478279	OTOL1	A6NHN0	477 aa	Predicted RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	CDX4	O14627	284 aa	Predicted RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	KHNYN	O15037	678 aa	Known RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	SOAT2	O75908	522 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	APBB3	O95704	486 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	CDC25C	P30307	473 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	MCM7	P33993	719 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	TUFM	P49411	452 aa	Known RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	AARS	P49588	968 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	GALK1	P51570	392 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	ECM1	Q16610	540 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	FBXO43	Q4G163	708 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	HAUS3	Q68CZ6	603 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	ARMCX5	Q6P1M9	558 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	DSTYK	Q6XUX3	929 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	SYT13	Q7L8C5	426 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	C11orf74	Q86VG3	221 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	TTC9B	Q8N6N2	239 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	EXOC4	Q96A65	974 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	ZBTB45	Q96K62	511 aa	Predicted RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	GCNA	Q96QF7	691 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	SLC46A2	Q9BY10	475 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	SMG9	Q9H0W8	520 aa	Known RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	EBF3	Q9H4W6	596 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	IL21	Q9HBE4	155 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	ARHGAP28	Q9P2N2	729 aa		11.52	□□□□□ -0.57
APTX-222	ENST00000478279	ZNF638	Q14966	1978 aa	Known RBP	11.52	□□□□□ -0.57
APTX-222	ENST00000478279	LARGE1	O95461	756 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	TYMP	P19971	482 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	CYP3A5	P20815	502 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	GBP1	P32455	592 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	CCT6A	P40227	531 aa	Known RBP	11.51	□□□□□ -0.57
APTX-222	ENST00000478279	DMP1	Q13316	513 aa	Predicted RBP	11.51	□□□□□ -0.57
APTX-222	ENST00000478279	DMC1	Q14565	340 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	VEPH1	Q14D04	833 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	SEZ6	Q53EL9	994 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	PMS2CL	Q68D20	193 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	TRIM68	Q6AZZ1	485 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	OVOS1	Q6IE37	1185 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	CMTM8	Q8IZV2	173 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	DAW1	Q8N136	415 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	TMEM130	Q8N3G9	435 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	RPLP0P6	Q8NHW5	317 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	P2RY13	Q9BPV8	354 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	PLEKHA5	Q9HAU0	1116 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	KMT5A	Q9NQR1	393 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	KIAA1024	Q9UPX6	916 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	NEUROG3	Q9Y4Z2	214 aa		11.51	□□□□□ -0.57
APTX-222	ENST00000478279	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.51	□□□□□ -0.57
APTX-222	ENST00000478279	PI4KA	P42356	2102 aa		11.5	□□□□□ -0.57
APTX-222	ENST00000478279	LOC400499	M0QZD8	3231 aa		11.5	□□□□□ -0.57
APTX-222	ENST00000478279	TAF4	O00268	1085 aa		11.5	□□□□□ -0.57
APTX-222	ENST00000478279	TOM1L1	O75674	476 aa		11.5	□□□□□ -0.57
APTX-222	ENST00000478279	OR52Z1	P0C646	297 aa		11.5	□□□□□ -0.57
APTX-222	ENST00000478279	GJA4	P35212	333 aa		11.5	□□□□□ -0.57
APTX-222	ENST00000478279	AVPR1A	P37288	418 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms