RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 KREMEN2Q8NCW0 462 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 OR10T2Q8NGX3 314 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 PTCD2Q8WV60 388 aaKnown RBP11.04□□□□□ -0.64
HDAC6-222ENST00000478095 TMEM209Q96SK2 561 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 MKNK1Q9BUB5 465 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 DZANK1Q9NVP4 752 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 FBXW11Q9UKB1 542 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 DSEQ9UL01 958 aa11.04□□□□□ -0.64
HDAC6-222ENST00000478095 USP15Q9Y4E8 981 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-222ENST00000478095 ARHGEF37A1IGU5 675 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 MBTPS2O43462 519 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 HCRTO43612 131 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 HUS1O60921 280 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 CYP11A1P05108 521 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 NUDT7P0C024 238 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 HOXB8P17481 243 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-222ENST00000478095 PAX3P23760 479 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 PIK3CAP42336 1068 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 AP3M2P53677 418 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 NLRP12P59046 1061 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 ZNF699Q32M78 642 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 ZACNQ401N2 412 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 CCDC40Q4G0X9 1142 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 CCDC183Q5T5S1 534 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 LIN9Q5TKA1 542 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 SCARA5Q6ZMJ2 495 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 ADGRF2Q8IZF7 708 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 MLKLQ8NB16 471 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 SLC7A14Q8TBB6 771 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 PGLYRP2Q96PD5 576 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 MED15Q96RN5 788 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 MMS19Q96T76 1030 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 RTP3Q9BQQ7 232 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 XYLT2Q9H1B5 865 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 S1PR5Q9H228 398 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 SFXN1Q9H9B4 322 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 GDAP2Q9NXN4 497 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 TMEM63CQ9P1W3 806 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
HDAC6-222ENST00000478095 RWDD2AQ9UIY3 292 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 UNC80Q8N2C7 3258 aa11.03□□□□□ -0.64
HDAC6-222ENST00000478095 SPTBN5Q9NRC6 3674 aaKnown RBP11.03□□□□□ -0.64
HDAC6-222ENST00000478095 CITO14578 2027 aa11.02□□□□□ -0.64
HDAC6-222ENST00000478095 OR6C75A6NL08 312 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 IKBKBO14920 756 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 LRRN2O75325 713 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 HLA-DRAP01903 254 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 C8AP07357 584 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 BMP1P13497 986 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 ACAT1P24752 427 aaKnown RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 TNNC1P63316 161 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 ADCY1Q08828 1119 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 CCDC142Q17RM4 750 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 SOWAHAQ2M3V2 549 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 WDR72Q3MJ13 1102 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 SPOPLQ6IQ16 392 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 CAVIN1Q6NZI2 390 aaKnown RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 ELMSAN1Q6PJG2 1045 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 C15orf39Q6ZRI6 1047 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 RBM43Q6ZSC3 357 aaKnown RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 OSTM1Q86WC4 334 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 THEM5Q8N1Q8 247 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 TOP6BLQ8N6T0 577 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 TAS1R2Q8TE23 839 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 SYAP1Q96A49 352 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 NECAB3Q96P71 396 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 PI4K2AQ9BTU6 479 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 SRRTQ9BXP5 876 aaKnown RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 ADAM7Q9H2U9 754 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 PLEKHA4Q9H4M7 779 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 TMEM8AQ9HCN3 771 aa11.02□□□□□ -0.65
HDAC6-222ENST00000478095 DDX43Q9NXZ2 648 aaKnown RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 ARMCX3Q9UH62 379 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-222ENST00000478095 CCDC195A0A1B0GUA6 201 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 PRRG1O14668 218 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 CCL16O15467 120 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ZMYND10O75800 440 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ABLIM3O94929 683 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 SEC24AO95486 1093 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 SP100P23497 879 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ATICP31939 592 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ELF1P32519 619 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 RAP1GAPP47736 663 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 MXI1P50539 228 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 CBX2Q14781 532 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-222ENST00000478095 PUS10Q3MIT2 529 aaKnown RBP11.01□□□□□ -0.65
HDAC6-222ENST00000478095 CBWD6Q4V339 395 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 SLC39A12Q504Y0 691 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ZNF667Q5HYK9 610 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 CBWD3Q5JTY5 395 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 CBWD5Q5RIA9 395 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 KRT39Q6A163 491 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 CES5AQ6NT32 575 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 FILIP1Q7Z7B0 1213 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms