RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PMM2O15305 246 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 PDE8AO60658 829 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CTNND1O60716 968 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 GAS7O60861 476 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TSC22D2O75157 780 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 RTN2O75298 545 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TBCAO75347 108 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ERLIN1O75477 346 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 KRT37O76014 449 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TGDSO95455 350 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 YEATS4O95619 227 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 IL33O95760 270 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 GUCA1CO95843 209 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 OLFM2O95897 454 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 OPN1MWP04001 364 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ITGB1P05556 798 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 OPN1MW2P0DN77 364 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 OPN1MW3P0DN78 364 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ZBTB48P10074 688 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 PSMA4P25789 261 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 RPL13P26373 211 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 AOAHP28039 575 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 IKQ13123 557 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 G3BP1Q13283 466 aaKnown RBP eCLIP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 KIAA0753Q2KHM9 967 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 VMACQ2NL98 169 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 C15orf59Q2T9L4 293 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 KBTBD12Q3ZCT8 623 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ATP13A4Q4VNC1 1196 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC30Q5VVM6 783 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 PRAMEF18Q5VWM3 479 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TRIM68Q6AZZ1 485 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 FSTL4Q6MZW2 842 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TMCO3Q6UWJ1 677 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ANGPTL8Q6UXH0 198 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC186Q7Z3E2 898 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC41A1Q8IVJ1 513 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 COLGALT2Q8IYK4 626 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TRMT2AQ8IZ69 625 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CARFQ8N187 725 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CAMKK1Q8N5S9 505 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ZBTB8BQ8NAP8 495 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TP53I13Q8NBR0 393 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TNIP2Q8NFZ5 429 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TRIM58Q8NG06 486 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 RASSF8Q8NHQ8 419 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC26Q8TAB7 109 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CCHCR1Q8TD31 782 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 GIMAP5Q96F15 307 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 COG3Q96JB2 828 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ZSWIM3Q96MP5 696 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 TIGD1Q96MW7 591 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 NAP1L3Q99457 506 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 MPHOSPH8Q99549 860 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 MTFR1LQ9H019 292 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 VCX3BQ9H321 246 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 RRAGDQ9NQL2 400 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 MAN1C1Q9NR34 630 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 IL1RAPL1Q9NZN1 696 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ARHGAP20Q9P2F6 1191 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 B4GALT6Q9UBX8 382 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CHORDC1Q9UHD1 332 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 CROTQ9UKG9 612 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 C19orf53Q9UNZ5 99 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ATP11BQ9Y2G3 1177 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ZKSCAN5Q9Y2L8 839 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 PTPN22Q9Y2R2 807 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ANGPTL3Q9Y5C1 460 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 SNX8Q9Y5X2 465 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 GAKO14976 1311 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ABCC10Q5T3U5 1492 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ABCC2Q92887 1545 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 KIAA0586Q9BVV6 1533 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 KIAA0556O60303 1618 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CTTNBP2Q8WZ74 1663 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 A0A1B0GTL3 188 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 BTBD11A6QL63 1104 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 AP3B1O00203 1094 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 GABRDO14764 452 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 FOXP2O15409 715 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ZBTB43O43298 467 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 STX6O43752 255 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 KDM1AO60341 852 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SOCS5O75159 536 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 TIPRLO75663 272 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC22A3O75751 556 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 FBXO21O94952 628 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 DNTTP04053 509 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CHGBP05060 677 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CPEP16870 476 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ZKSCAN1P17029 563 aaPredicted RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ZNF28P17035 718 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 GNAT2P19087 354 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CYP11B2P19099 503 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 HDCP19113 662 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 PTGS1P23219 599 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 YY1P25490 414 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 TMOD1P28289 359 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms