RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CORO1BQ9BR76 489 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 SLC2A4RGQ9NR83 387 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 DENND4CQ5VZ89 1909 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 PTPRJQ12913 1337 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 CLIC2O15247 247 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 TMEM191BP0C7N4 346 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 VCPP55072 806 aaKnown RBP23.43■■□□□ 1.34
COL9A3-211ENST00000477612 SNRNP35Q16560 246 aaKnown RBP23.43■■□□□ 1.34
COL9A3-211ENST00000477612 DUOXA2Q1HG44 320 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 KMT5BQ4FZB7 885 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 IER5LQ5T953 404 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 WDR49Q8IV35 697 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 KIAA0895Q8NCT3 520 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 NOC3LQ8WTT2 800 aaKnown RBP23.43■■□□□ 1.34
COL9A3-211ENST00000477612 FAM122AQ96E09 287 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 RPP25Q9BUL9 199 aaKnown RBP23.43■■□□□ 1.34
COL9A3-211ENST00000477612 LRRC3Q9BY71 257 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 MTMR12Q9C0I1 747 aa23.43■■□□□ 1.34
COL9A3-211ENST00000477612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.42■■□□□ 1.34
COL9A3-211ENST00000477612 MOSPD3O75425 235 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 NPR3P17342 541 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 CCR2P41597 374 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 CLCN5P51795 746 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 CYP4A22Q5TCH4 519 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 PDZD4Q76G19 769 aaPredicted RBP23.42■■□□□ 1.34
COL9A3-211ENST00000477612 ATAD1Q8NBU5 361 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 OR5B17Q8NGF7 314 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 C2orf15Q8WU43 125 aaKnown RBP23.42■■□□□ 1.34
COL9A3-211ENST00000477612 DNAJC25Q9H1X3 360 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 ASB3Q9Y575 518 aa23.42■■□□□ 1.34
COL9A3-211ENST00000477612 CEBPBP17676 345 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 NUCB2P80303 420 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 PSMD6Q15008 389 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 DPH6Q7L8W6 267 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 LIMS2Q7Z4I7 341 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 LRRTM3Q86VH5 581 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 HS6ST3Q8IZP7 471 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 TMEM86AQ8N2M4 240 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 PDCL2Q8N4E4 241 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 GOLGA5Q8TBA6 731 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 SPPL2BQ8TCT7 592 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 ING5Q8WYH8 240 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 TCEAL4Q96EI5 215 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 MCRS1Q96EZ8 462 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 FAM84AQ96KN4 292 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 EXOC1Q9NV70 894 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 L1RE1Q9UN81 338 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 SLC27A5Q9Y2P5 690 aa23.41■■□□□ 1.34
COL9A3-211ENST00000477612 HUS1O60921 280 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 PRPF40AO75400 957 aaKnown RBP23.4■■□□□ 1.34
COL9A3-211ENST00000477612 ECI2O75521 394 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 ALDH1A3P47895 512 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 TUFMP49411 452 aaKnown RBP23.4■■□□□ 1.34
COL9A3-211ENST00000477612 EPHB3P54753 998 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 CYP24A1Q07973 514 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 SLC39A12Q504Y0 691 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 LMBRD2Q68DH5 695 aaPredicted RBP23.4■■□□□ 1.34
COL9A3-211ENST00000477612 CWF19L1Q69YN2 538 aaKnown RBP23.4■■□□□ 1.34
COL9A3-211ENST00000477612 ASTLQ6HA08 431 aaPredicted RBP23.4■■□□□ 1.34
COL9A3-211ENST00000477612 KRBA2Q6ZNG9 492 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 TMC8Q8IU68 726 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 SLC9A9Q8IVB4 645 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 TOP6BLQ8N6T0 577 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 RDH13Q8NBN7 331 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 ACBD6Q9BR61 282 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 KCTD10Q9H3F6 313 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 ASAH2Q9NR71 780 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 DMAC2Q9NW81 257 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 FBXL21Q9UKT6 434 aa23.4■■□□□ 1.34
COL9A3-211ENST00000477612 KRBA1A5PL33 1030 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 GABRDO14764 452 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 TNNC2P02585 160 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 RPN1P04843 607 aaKnown RBP23.39■■□□□ 1.33
COL9A3-211ENST00000477612 CFHP08603 1231 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 KRT19P08727 400 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 CYP2J2P51589 502 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 DPYDQ12882 1025 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 TRAPPC11Q7Z392 1133 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 DCP1BQ8IZD4 617 aaKnown RBP23.39■■□□□ 1.33
COL9A3-211ENST00000477612 TTC9BQ8N6N2 239 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 FSIP1Q8NA03 581 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 PRSS33Q8NF86 280 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 GPR152Q8TDT2 470 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 PSMG2Q969U7 264 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 ELSPBP1Q96BH3 223 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 CGRRF1Q99675 332 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 GZF1Q9H116 711 aaPredicted RBP23.39■■□□□ 1.33
COL9A3-211ENST00000477612 MFSD1Q9H3U5 465 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 GOLPH3LQ9H4A5 285 aa23.39■■□□□ 1.33
COL9A3-211ENST00000477612 PDXKO00764 312 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 NRG2O14511 850 aaPredicted RBP23.38■■□□□ 1.33
COL9A3-211ENST00000477612 RHOBTB3O94955 611 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 ZNF202O95125 648 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 GPC5P78333 572 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 BFSP1Q12934 665 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 MYO1EQ12965 1108 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 SIX5Q8N196 739 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 TMEM105Q8N8V8 129 aa23.38■■□□□ 1.33
COL9A3-211ENST00000477612 ST13P5Q8NFI4 369 aaPredicted RBP23.38■■□□□ 1.33
COL9A3-211ENST00000477612 GPR88Q9GZN0 384 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms