RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OR6B1O95007 311 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 IFNAR2P48551 515 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 PCYT1AP49585 367 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 KIF11P52732 1056 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 HSPA14Q0VDF9 509 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 MED21Q13503 144 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 MTFR1Q15390 333 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 VWA3BQ502W6 1294 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 KLHDC7AQ5VTJ3 777 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 IZUMO2Q6UXV1 221 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 DCLK2Q8N568 766 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 NOX5Q96PH1 765 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 LRRC37BQ96QE4 947 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 AMNQ9BXJ7 453 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 MYOZ2Q9NPC6 264 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 SAR1AQ9NR31 198 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 TMEM260Q9NX78 707 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 KLHL3Q9UH77 587 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 HAO1Q9UJM8 370 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 ZNF536O15090 1300 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 CNTNAP1P78357 1384 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 PFDN6O15212 129 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 PRCPP42785 496 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 CLK2P49760 499 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 MCCD1P59942 119 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 XIAPP98170 497 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 TNFAIP1Q13829 316 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 RASA2Q15283 850 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 CALCRLQ16602 461 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 C15orf59Q2T9L4 293 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 ACSBG2Q5FVE4 666 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 LVRNQ6Q4G3 990 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 ITIH5Q86UX2 942 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 ERI1Q8IV48 349 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 MB21D1Q8N884 522 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 ZBED3Q96IU2 234 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 C8orf48Q96LL4 319 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 KIAA1683Q9H0B3 1180 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 TBC1D23Q9NUY8 699 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 KCNJ18B7U540 433 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 DDX3XO00571 662 aaKnown RBP eCLIP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 DKC1O60832 514 aaKnown RBP eCLIP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 KRT36O76013 467 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CDH3P22223 829 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 KCNJ12Q14500 433 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CRY1Q16526 586 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 NXNQ6DKJ4 435 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 ANO5Q75V66 913 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 FASTKD5Q7L8L6 764 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 NET1Q7Z628 596 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 ZNF598Q86UK7 904 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CKAP2Q8WWK9 683 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 MS4A14Q96JA4 679 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 EGLN2Q96KS0 407 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 ZBTB21Q9ULJ3 1066 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 BCS1LQ9Y276 419 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 WNT10BO00744 389 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 OCM2P0CE71 109 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 OCMP0CE72 109 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 LMNB1P20700 586 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CCNCP24863 283 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 THOP1P52888 689 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 STX17P56962 302 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 DR1Q01658 176 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CDR2Q01850 454 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 KCNC4Q03721 635 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 ASPHQ12797 758 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 AP3B2Q13367 1082 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 PHKG1Q16816 387 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 FBXO11Q86XK2 927 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 ERP27Q96DN0 273 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 CALML4Q96GE6 196 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 PSMB7Q99436 277 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 TUBB6Q9BUF5 446 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 TTYH3Q9C0H2 523 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 KIAA1257Q9ULG3 409 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
RTFDC1-207ENST00000477573 A0A1W2PQJ5 194 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 F8W8V4 182 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 CCDC188H7C350 402 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 NFKBIEO00221 500 aa13.3□□□□□ -0.28
RTFDC1-207ENST00000477573 MZF1P28698 734 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms