RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 LMO3Q8TAP4 145 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 TCF25Q9BQ70 676 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 LSM14BQ9BX40 385 aaKnown RBP16.42■□□□□ 0.22
SEC13-215ENST00000477547 CD320Q9NPF0 282 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
SEC13-215ENST00000477547 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 DSEQ9UL01 958 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 COG5Q9UP83 839 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 TIMM13Q9Y5L4 95 aaPredicted RBP16.42■□□□□ 0.22
SEC13-215ENST00000477547 C2CD2LO14523 706 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 CTSAP10619 480 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 SLC9A1P19634 815 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 POU3F3P20264 500 aaPredicted RBP16.41■□□□□ 0.22
SEC13-215ENST00000477547 PON1P27169 355 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 UBASH3AP57075 661 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 PLCB2Q00722 1185 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 YWHAHQ04917 246 aaPredicted RBP16.41■□□□□ 0.22
SEC13-215ENST00000477547 SYCP1Q15431 976 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 VARS2Q5ST30 1063 aaKnown RBP16.41■□□□□ 0.22
SEC13-215ENST00000477547 PLPP4Q5VZY2 271 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 WSCD1Q658N2 575 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 OVOS1Q6IE37 1185 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 ZNF280DQ6N043 979 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 TMC7Q7Z402 723 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 METTL23Q86XA0 190 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 ARHGEF19Q8IW93 802 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 TMEM86AQ8N2M4 240 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 PPM1KQ8N3J5 372 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 EHBP1Q8NDI1 1231 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 AUTS2Q8WXX7 1259 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 RIN2Q8WYP3 895 aaPredicted RBP16.41■□□□□ 0.22
SEC13-215ENST00000477547 PCMTD1Q96MG8 357 aaPredicted RBP16.41■□□□□ 0.22
SEC13-215ENST00000477547 ARID3AQ99856 593 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 LMAN2LQ9H0V9 348 aa16.41■□□□□ 0.22
SEC13-215ENST00000477547 MTCL1Q9Y4B5 1905 aaKnown RBP16.41■□□□□ 0.22
SEC13-215ENST00000477547 PIEZO1Q92508 2521 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.4■□□□□ 0.22
SEC13-215ENST00000477547 TEX33O43247 280 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 CYP11A1P05108 521 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 TPM3P06753 285 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 TBXAS1P24557 533 aaPredicted RBP16.4■□□□□ 0.22
SEC13-215ENST00000477547 APBA1Q02410 837 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 DSG1Q02413 1049 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 CUL2Q13617 745 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 SMC1AQ14683 1233 aaKnown RBP16.4■□□□□ 0.22
SEC13-215ENST00000477547 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 PSMD5Q16401 504 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 SOWAHAQ2M3V2 549 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 PRSS55Q6UWB4 352 aaPredicted RBP16.4■□□□□ 0.22
SEC13-215ENST00000477547 ANKS3Q6ZW76 656 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 PIK3R5Q8WYR1 880 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 TATDN2Q93075 761 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 HLA-CQ95604 372 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 NAP1L5Q96NT1 182 aaPredicted RBP16.4■□□□□ 0.22
SEC13-215ENST00000477547 BCO2Q9BYV7 579 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 SDCBP2Q9H190 292 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 MRPL17Q9NRX2 175 aaKnown RBP16.4■□□□□ 0.22
SEC13-215ENST00000477547 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 APEX2Q9UBZ4 518 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
SEC13-215ENST00000477547 FSCN2O14926 492 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 CBFA2T2O43439 604 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 LPXNO60711 386 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 IRS1P35568 1242 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 KLK7P49862 253 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 ERVFC1P60507 584 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 CREMQ03060 361 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 KCNMA1Q12791 1236 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 CAMK1Q14012 370 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
SEC13-215ENST00000477547 PTPROQ16827 1216 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 PDXDC1Q6P996 788 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 DPH6Q7L8W6 267 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 SPATA18Q8TC71 538 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 KBTBD7Q8WVZ9 684 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 FAXDC2Q96IV6 333 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 ERGIC2Q96RQ1 377 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 MRPL45Q9BRJ2 306 aaKnown RBP16.39■□□□□ 0.21
SEC13-215ENST00000477547 XPO4Q9C0E2 1151 aaKnown RBP16.39■□□□□ 0.21
SEC13-215ENST00000477547 SIX2Q9NPC8 291 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 FAM207AQ9NSI2 230 aaPredicted RBP16.39■□□□□ 0.21
SEC13-215ENST00000477547 MTRRQ9UBK8 725 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
SEC13-215ENST00000477547 PATJQ8NI35 1801 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 H7C4K7 107 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 TACC1O75410 805 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 CD58P19256 250 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 WARSP23381 471 aaKnown RBP16.38■□□□□ 0.21
SEC13-215ENST00000477547 GCNT1Q02742 428 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 PTPN21Q16825 1174 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 CTXN3Q4LDR2 81 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 KIAA0319Q5VV43 1072 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 GJB7Q6PEY0 223 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 SARM1Q6SZW1 724 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 LIMS2Q7Z4I7 341 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 OSTM1Q86WC4 334 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 MICAL1Q8TDZ2 1067 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 KAT5Q92993 513 aa16.38■□□□□ 0.21
SEC13-215ENST00000477547 MRPL38Q96DV4 380 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms