RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 RPS6KA4O75676 772 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 KRT38O76015 456 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 DDX58O95786 925 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 BMP15O95972 392 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 PLA2G1BP04054 148 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 LDHBP07195 334 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ZFYP08048 801 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CCNB1P14635 433 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 IDEP14735 1019 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 PRKCAP17252 672 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 TRIM21P19474 475 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ATP5DP30049 168 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 GNA15P30679 374 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 IL6STP40189 918 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 MAGEA10P43363 369 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 SEC24CP53992 1094 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 POLE2P56282 527 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ADAM17P78536 824 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CAP1Q01518 475 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CBX3Q13185 183 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ADAM9Q13443 819 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ITPK1Q13572 414 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ACVR2BQ13705 512 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CBX2Q14781 532 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 NONOQ15233 471 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 EZH2Q15910 746 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF827Q17R98 1081 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 KRT24Q2M2I5 525 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CFAP157Q5JU67 520 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 MEI1Q5TIA1 1274 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 OR52E8Q6IFG1 317 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 SLC4A10Q6U841 1118 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 RPTNQ6XPR3 784 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 C3orf62Q6ZUJ4 267 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 TAOK1Q7L7X3 1001 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 LRRC49Q8IUZ0 686 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 SYCP3Q8IZU3 236 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 PHC3Q8NDX5 983 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 TRPC4APQ8TEL6 797 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 WDR60Q8WVS4 1066 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ATXN2LQ8WWM7 1075 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 DNAJC9Q8WXX5 260 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 RAPGEF5Q92565 580 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 PGM2Q96G03 612 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ZMAT2Q96NC0 199 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 NUP88Q99567 741 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 DNAJC7Q99615 494 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 EDEM3Q9BZQ6 932 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 ISCUQ9H1K1 167 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 THAP9Q9H5L6 903 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 RXFP1Q9HBX9 757 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 JADE2Q9NQC1 790 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 PANK4Q9NVE7 773 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 STK32BQ9NY57 414 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 THEGQ9P2T0 379 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 TNFRSF10DQ9UBN6 386 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 HDAC6Q9UBN7 1215 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 TUBGCP4Q9UGJ1 667 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CROTQ9UKG9 612 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CAPN11Q9UMQ6 739 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 GUCA1BQ9UMX6 200 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 MINPP1Q9UNW1 487 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 FRMD4BQ9Y2L6 1034 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 POLR3KQ9Y2Y1 108 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 L3MBTL1Q9Y468 752 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 LAMB4A4D0S4 1761 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CICQ96RK0 1608 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CARMIL3Q8ND23 1372 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TAF1LQ8IZX4 1826 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 MYH14Q7Z406 1995 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PNMA6EA0A0J9YXQ4 647 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 A0A1W2PQJ5 194 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SSU72P8A0A1W2PR75 194 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC188H7C350 402 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 OVOL3O00110 214 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 LSM1O15116 133 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 KDM1AO60341 852 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ECE2O60344 883 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 JAK2O60674 1132 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CBFA2T3O75081 653 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF189O75820 626 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 MBD4O95243 580 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 HTR3BO95264 441 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 EYA4O95677 639 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 KRT14P02533 472 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 GYPCP04921 128 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ATP1A1P05023 1023 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CPA1P15085 419 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CYP11B2P19099 503 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 VHLP40337 213 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ARL4AP40617 200 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 RGS2P41220 211 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 STAT6P42226 847 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TRPC1P48995 793 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 DNM2P50570 870 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF200P98182 395 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CEBPZQ03701 1054 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 RNASELQ05823 741 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CYLC2Q14093 348 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms