RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 PSMC3IPQ9P2W1 217 aaPredicted RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 NOCTQ9UK39 431 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 GRID1Q9ULK0 1009 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 NFASCO94856 1347 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 EML1O00423 815 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 TGDSO95455 350 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 RRM1P23921 792 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 RPA3P35244 121 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 MAP7Q14244 749 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 CCNG2Q16589 344 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 TRMT5Q32P41 509 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 APOBEC3FQ8IUX4 373 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 SKA1Q96BD8 255 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 ALKBH8Q96BT7 664 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 AGPAT3Q9NRZ7 376 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 DDNO94850 711 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 IL1BP01584 269 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 PIM1P11309 404 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 CRABP2P29373 138 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 RPL26P61254 145 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 CDK16Q00536 496 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 SLC1A5Q15758 541 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 GPR162Q16538 588 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 C9orf131Q5VYM1 1079 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 LVRNQ6Q4G3 990 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 NET1Q7Z628 596 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 FAM81BQ96LP2 452 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 BHMT2Q9H2M3 363 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 EPB41L1Q9H4G0 881 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 GPAMQ9HCL2 828 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 GPCPD1Q9NPB8 672 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 ARL8BQ9NVJ2 186 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 PGAP2Q9UHJ9 254 aa16.09■□□□□ 0.17
CLSTN1-205ENST00000477264 ASTN2O75129 1339 aaPredicted RBP16.08■□□□□ 0.17
CLSTN1-205ENST00000477264 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 PMM2O15305 246 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 COQ9O75208 318 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 PABPC4LP0CB38 370 aaKnown RBP16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 KCNA1Q09470 495 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 PKN2Q16513 984 aaKnown RBP16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 EPC2Q52LR7 807 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 ANGEL2Q5VTE6 544 aaKnown RBP16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 ACAD11Q709F0 780 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 ECSITQ9BQ95 431 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 VPS11Q9H270 941 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 ZBTB21Q9ULJ3 1066 aa16.08■□□□□ 0.16
CLSTN1-205ENST00000477264 SMIM31A0A1B0GVY4 71 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 MEIS1O00470 390 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 CIB2O75838 187 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 RARBP10826 455 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 ESRRAP11474 423 aaPredicted RBP16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 AP2B1P63010 937 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 SEPT7Q16181 437 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 CYP4F22Q6NT55 531 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 RINT1Q6NUQ1 792 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 ADGRG6Q86SQ4 1221 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 KBTBD2Q8IY47 623 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 FAM71AQ8IYT1 594 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 SCYL3Q8IZE3 742 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 PIP4K2CQ8TBX8 421 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 CCDC110Q8TBZ0 833 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 CRYGNQ8WXF5 182 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 TEPSINQ96N21 525 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 PCDHB18PQ96TA0 734 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 PHACTR1Q9C0D0 580 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 SSX2IPQ9Y2D8 614 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 ATP9BO43861 1147 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 UBTFL6P0CB48 400 aaPredicted RBP16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 CAP2P40123 477 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 CYP2J2P51589 502 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 ARFIP2P53365 341 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 JAG1P78504 1218 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 HNRNPDQ14103 355 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 MYBPC3Q14896 1274 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 ZNF746Q6NUN9 644 aaPredicted RBP16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 TMEM174Q8WUU8 243 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 ATG4AQ8WYN0 398 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 TUFT1Q9NNX1 390 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 SAYSD1Q9NPB0 183 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 ZDHHC7Q9NXF8 308 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 NDE1Q9NXR1 346 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 KCND2Q9NZV8 630 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 KANSL3Q9P2N6 904 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 HEY2Q9UBP5 337 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 SYNPO2Q9UMS6 1093 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 POLIQ9UNA4 740 aa16.07■□□□□ 0.16
CLSTN1-205ENST00000477264 CFAP69A5D8W1 941 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms