RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 WDR49Q8IV35 697 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 NPAS3Q8IXF0 933 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 PDCL2Q8N4E4 241 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 TTC9BQ8N6N2 239 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 CCDC127Q96BQ5 260 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 TCEAL4Q96EI5 215 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 CORO1BQ9BR76 489 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 L1RE1Q9UN81 338 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 DUSP12Q9UNI6 340 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 SLC27A5Q9Y2P5 690 aa22.79■■□□□ 1.24
LIME1-204ENST00000476183 MRPS23Q9Y3D9 190 aaKnown RBP22.79■■□□□ 1.24
LIME1-204ENST00000476183 ZFP37Q9Y6Q3 630 aaPredicted RBP22.79■■□□□ 1.24
LIME1-204ENST00000476183 RHOBTB3O94955 611 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 TNNC2P02585 160 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 DLATP10515 647 aaKnown RBP22.78■■□□□ 1.24
LIME1-204ENST00000476183 CCR2P41597 374 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 SLC39A12Q504Y0 691 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 HS6ST3Q8IZP7 471 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 FMR1NBQ8N0W7 255 aaPredicted RBP22.78■■□□□ 1.24
LIME1-204ENST00000476183 SLC44A3Q8N4M1 653 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 PLEKHO2Q8TD55 490 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 FGF14Q92915 247 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 MFSD14AQ96MC6 490 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 CGRRF1Q99675 332 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 RPP25Q9BUL9 199 aaKnown RBP22.78■■□□□ 1.24
LIME1-204ENST00000476183 DNAJC25Q9H1X3 360 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 DMAC2Q9NW81 257 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 NUMBLQ9Y6R0 609 aa22.78■■□□□ 1.24
LIME1-204ENST00000476183 EXOC3O60645 756 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 CEBPBP17676 345 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 PARM1Q6UWI2 310 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 TRAPPC11Q7Z392 1133 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 THEM5Q8N1Q8 247 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 GOLGA5Q8TBA6 731 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 NXPE3Q969Y0 559 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 GDAP2Q9NXN4 497 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 HCN4Q9Y3Q4 1203 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 SNX9Q9Y5X1 595 aa22.77■■□□□ 1.24
LIME1-204ENST00000476183 SOAT2O75908 522 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 TNNI1P19237 187 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 CASP4P49662 377 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 SNW1Q13573 536 aaKnown RBP22.76■■□□□ 1.23
LIME1-204ENST00000476183 OSTM1Q86WC4 334 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 FBXL6Q8N531 539 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 ENGASEQ8NFI3 743 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 ZNF516Q92618 1163 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 ZNF512Q96ME7 567 aaPredicted RBP22.76■■□□□ 1.23
LIME1-204ENST00000476183 FNBP1Q96RU3 617 aa22.76■■□□□ 1.23
LIME1-204ENST00000476183 PDXKO00764 312 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 HUS1O60921 280 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 MOSPD3O75425 235 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 KCNB1Q14721 858 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 SLC9A9Q8IVB4 645 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 ELMOD1Q8N336 334 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 TMEM174Q8WUU8 243 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 MCRS1Q96EZ8 462 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 HPDLQ96IR7 371 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 LRRC3Q9BY71 257 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 TMLHEQ9NVH6 421 aa22.75■■□□□ 1.23
LIME1-204ENST00000476183 HCRTO43612 131 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 PRPF40AO75400 957 aaKnown RBP22.74■■□□□ 1.23
LIME1-204ENST00000476183 CST3P01034 146 aaPredicted RBP22.74■■□□□ 1.23
LIME1-204ENST00000476183 EPHA5P54756 1037 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 MYO1EQ12965 1108 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 PNOCQ13519 176 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 SOWAHAQ2M3V2 549 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 IQCEQ6IPM2 695 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 PDZD4Q76G19 769 aaPredicted RBP22.74■■□□□ 1.23
LIME1-204ENST00000476183 LIMS2Q7Z4I7 341 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 TMEM86AQ8N2M4 240 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 TOP6BLQ8N6T0 577 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 CCDC47Q96A33 483 aaKnown RBP22.74■■□□□ 1.23
LIME1-204ENST00000476183 DDX43Q9NXZ2 648 aaKnown RBP22.74■■□□□ 1.23
LIME1-204ENST00000476183 HSFX1Q9UBD0 423 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 MAPK8IP1Q9UQF2 711 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 KMT2EQ8IZD2 1858 aa22.74■■□□□ 1.23
LIME1-204ENST00000476183 GOLGA6L4A6NEF3 574 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 NR3C1P04150 777 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 GJA1P17302 382 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 ACAT1P24752 427 aaKnown RBP22.73■■□□□ 1.23
LIME1-204ENST00000476183 ALDH1A3P47895 512 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 EPHB3P54753 998 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 VCPP55072 806 aaKnown RBP22.73■■□□□ 1.23
LIME1-204ENST00000476183 PLD1Q13393 1074 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 CYP4A22Q5TCH4 519 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 TMC8Q8IU68 726 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 SUGP1Q8IWZ8 645 aaKnown RBP22.73■■□□□ 1.23
LIME1-204ENST00000476183 ADGRF2Q8IZF7 708 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 ASAH2Q9NR71 780 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 GDE1Q9NZC3 331 aa22.73■■□□□ 1.23
LIME1-204ENST00000476183 R3HCC1Q9Y3T6 440 aaKnown RBP22.73■■□□□ 1.23
LIME1-204ENST00000476183 ZNF197O14709 1029 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 GABRDO14764 452 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 MICAL2O94851 1124 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 CFHP08603 1231 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 SRFP11831 508 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 MYL4P12829 197 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 CCDC142Q17RM4 750 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 MTSS1LQ765P7 747 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 DCP1BQ8IZD4 617 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms