RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 TAF6P49848 677 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 NDST1P52848 882 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 EPHB4P54760 987 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 IKBKEQ14164 716 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 SLC18A3Q16572 532 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 CCDC122Q5T0U0 273 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 MFSD5Q6N075 450 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 KRT222Q8N1A0 295 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 LRRC52Q8N7C0 313 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 C12orf29Q8N999 325 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 SLC30A5Q8TAD4 765 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 DPEP3Q9H4B8 488 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 SLC38A7Q9NVC3 462 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 L1RE1Q9UN81 338 aa19.3■□□□□ 0.68
ATG4B-217ENST00000475693 TDRD15B5MCY1 1934 aaKnown RBP19.3■□□□□ 0.68
ATG4B-217ENST00000475693 GNA15P30679 374 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 ZNF132P52740 706 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 RAD23BP54727 409 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 RNASELQ05823 741 aaKnown RBP19.29■□□□□ 0.68
ATG4B-217ENST00000475693 NAGPAQ9UK23 515 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 CNTN6Q9UQ52 1028 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 PRG3Q9Y2Y8 225 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-217ENST00000475693 NT5C1B-RDH14C9J2C7 533 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 THAP12O43422 761 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 ARHGAP25P42331 645 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 MAGEA1P43355 309 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 PDE6CP51160 858 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 GRIK3Q13003 919 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 TIGD5Q53EQ6 642 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 ALKBH5Q6P6C2 394 aaKnown RBP19.29■□□□□ 0.68
ATG4B-217ENST00000475693 CNKSR3Q6P9H4 555 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 PHLDB2Q86SQ0 1253 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 SLC4A11Q8NBS3 891 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 KBTBD7Q8WVZ9 684 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 UBN1Q9NPG3 1134 aa19.29■□□□□ 0.68
ATG4B-217ENST00000475693 ZMYND8Q9ULU4 1186 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-217ENST00000475693 BZW2Q9Y6E2 419 aaKnown RBP19.29■□□□□ 0.68
ATG4B-217ENST00000475693 TBKBP1A7MCY6 615 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 CYB561D2O14569 222 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 CILPO75339 1184 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 KIF4AO95239 1232 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 TUSC3Q13454 348 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 NAA30Q147X3 362 aaPredicted RBP19.28■□□□□ 0.68
ATG4B-217ENST00000475693 SPA17Q15506 151 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 WSCD1Q658N2 575 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 ABI1Q8IZP0 508 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 OR6B3Q8NGW1 331 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 SALL4Q9UJQ4 1053 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 DAAM1Q9Y4D1 1078 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 CEP290O15078 2479 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 LCA5LO95447 670 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 STAU1O95793 577 aaKnown RBP19.28■□□□□ 0.68
ATG4B-217ENST00000475693 CD19P15391 556 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 ACAT1P24752 427 aaKnown RBP19.28■□□□□ 0.68
ATG4B-217ENST00000475693 OR1G1P47890 313 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 BCAR1P56945 870 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 KIAA1328Q86T90 577 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 ACOT1Q86TX2 421 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 OSTM1Q86WC4 334 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 ZNF606Q8WXB4 792 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 CPA5Q8WXQ8 436 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 SENP8Q96LD8 212 aa19.28■□□□□ 0.68
ATG4B-217ENST00000475693 MICAL3Q7RTP6 2002 aa19.27■□□□□ 0.68
ATG4B-217ENST00000475693 ATP2C2O75185 946 aa19.27■□□□□ 0.68
ATG4B-217ENST00000475693 CDR2Q01850 454 aa19.27■□□□□ 0.68
ATG4B-217ENST00000475693 COLGALT2Q8IYK4 626 aa19.27■□□□□ 0.68
ATG4B-217ENST00000475693 CYFIP2Q96F07 1278 aa19.27■□□□□ 0.68
ATG4B-217ENST00000475693 NRDE2Q9H7Z3 1164 aa19.27■□□□□ 0.68
ATG4B-217ENST00000475693 GUCA1BQ9UMX6 200 aa19.27■□□□□ 0.68
ATG4B-217ENST00000475693 CCDC172P0C7W6 258 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 P4HA1P13674 534 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 ABCB4P21439 1286 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 SV2CQ496J9 727 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 LLGL2Q6P1M3 1020 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 TMEM199Q8N511 208 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 FAM81BQ96LP2 452 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 HEXIM2Q96MH2 286 aaKnown RBP19.27■□□□□ 0.67
ATG4B-217ENST00000475693 ZNF560Q96MR9 790 aa19.27■□□□□ 0.67
ATG4B-217ENST00000475693 ELAC1Q9H777 363 aaKnown RBP19.27■□□□□ 0.67
ATG4B-217ENST00000475693 CHD7Q9P2D1 2997 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 PARNO95453 639 aaKnown RBP19.26■□□□□ 0.67
ATG4B-217ENST00000475693 BMS1Q14692 1282 aaKnown RBP19.26■□□□□ 0.67
ATG4B-217ENST00000475693 DSTYKQ6XUX3 929 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 URGCPQ8TCY9 931 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 JAKMIP2Q96AA8 810 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 FAM49BQ9NUQ9 324 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 GDAP2Q9NXN4 497 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 BARX2Q9UMQ3 279 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-217ENST00000475693 NENFQ9UMX5 172 aa19.26■□□□□ 0.67
ATG4B-217ENST00000475693 MACROD2A1Z1Q3 448 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 ZSCAN12O43309 604 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 PSMC1P62191 440 aaKnown RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 DSC1Q08554 894 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 ZNF365Q70YC5 407 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 TMEM173Q86WV6 379 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 TMEM176AQ96HP8 235 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 B3GALT6Q96L58 329 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 TSPAN18Q96SJ8 248 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 CYP3A43Q9HB55 503 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms