RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 NBR1Q14596 966 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 EPHA7Q15375 998 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 USP39Q53GS9 565 aaKnown RBP15.37■□□□□ 0.05
ATG9A-220ENST00000475339 TPGS2Q68CL5 300 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 SYT13Q7L8C5 426 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 ZNF605Q86T29 641 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 C11orf74Q86VG3 221 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 RPLP0P6Q8NHW5 317 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 UBL7Q96S82 380 aaPredicted RBP15.37■□□□□ 0.05
ATG9A-220ENST00000475339 NUSAP1Q9BXS6 441 aaKnown RBP15.37■□□□□ 0.05
ATG9A-220ENST00000475339 TPSD1Q9BZJ3 242 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 TMEM60Q9H2L4 133 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 GOLGA2P5Q9HBQ8 144 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 FBXL5Q9UKA1 691 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 PI4KAP42356 2102 aa15.37■□□□□ 0.05
ATG9A-220ENST00000475339 OTOL1A6NHN0 477 aaPredicted RBP15.36■□□□□ 0.05
ATG9A-220ENST00000475339 GLRA2P23416 452 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 DMC1Q14565 340 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 RILPL1Q5EBL4 403 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 TMC8Q8IU68 726 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 HDDC3Q8N4P3 179 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 PNPLA1Q8N8W4 532 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 BPIFB1Q8TDL5 484 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 MTMR9Q96QG7 549 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 LXNQ9BS40 222 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 NFKBIZQ9BYH8 718 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 FSCN3Q9NQT6 498 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 TMEM74BQ9NUR3 256 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 AFF4Q9UHB7 1163 aaKnown RBP15.36■□□□□ 0.05
ATG9A-220ENST00000475339 GDAQ9Y2T3 454 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 RAI2Q9Y5P3 530 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 CFAP46Q8IYW2 2715 aa15.36■□□□□ 0.05
ATG9A-220ENST00000475339 PLXNB3Q9ULL4 1909 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 SHROOM3Q8TF72 1996 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 PRAMEF12O95522 483 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 ARL2P36404 184 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 CYP4A11Q02928 519 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 PTPAQ15257 358 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 CTXN3Q4LDR2 81 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 NAIF1Q69YI7 327 aaPredicted RBP15.35■□□□□ 0.05
ATG9A-220ENST00000475339 OTUD6AQ7L8S5 288 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 C4orf19Q8IY42 314 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 ERMNQ8TAM6 284 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 ADAMTS14Q8WXS8 1223 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 DYDC2Q96IM9 177 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 CCDC43Q96MW1 224 aaKnown RBP15.35■□□□□ 0.05
ATG9A-220ENST00000475339 PPP1R10Q96QC0 940 aaKnown RBP15.35■□□□□ 0.05
ATG9A-220ENST00000475339 ZSWIM4Q9H7M6 989 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 GKN1Q9NS71 199 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 OBP2AQ9NY56 170 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 RGL1Q9NZL6 768 aa15.35■□□□□ 0.05
ATG9A-220ENST00000475339 H7C4K7 107 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 TK2O00142 265 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 GALK1P51570 392 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 MRPL58Q14197 206 aaKnown RBP15.34■□□□□ 0.05
ATG9A-220ENST00000475339 RNF19BQ6ZMZ0 732 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 GAREM2Q75VX8 874 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 ARMCX6Q7L4S7 300 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 BRAPQ7Z569 592 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 TPH2Q8IWU9 490 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 TSTD1Q8NFU3 115 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 EIF2AK1Q9BQI3 630 aaKnown RBP15.34■□□□□ 0.05
ATG9A-220ENST00000475339 GTPBP2Q9BX10 602 aaKnown RBP15.34■□□□□ 0.05
ATG9A-220ENST00000475339 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 SMG9Q9H0W8 520 aaKnown RBP15.34■□□□□ 0.05
ATG9A-220ENST00000475339 DNAJC25Q9H1X3 360 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 EBF3Q9H4W6 596 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 PDZD7Q9H5P4 517 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 HPS4Q9NQG7 708 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 YIPF1Q9Y548 306 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 PCDHB6Q9Y5E3 794 aa15.34■□□□□ 0.05
ATG9A-220ENST00000475339 LAD1O00515 517 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 SYN3O14994 580 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 DRD1P21728 446 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 PTGER3P43115 390 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 TOB1P50616 345 aaPredicted RBP15.33■□□□□ 0.04
ATG9A-220ENST00000475339 ATXN3P54252 364 aaPredicted RBP15.33■□□□□ 0.04
ATG9A-220ENST00000475339 RUNX3Q13761 415 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.04
ATG9A-220ENST00000475339 GPR158Q5T848 1215 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 TRIM68Q6AZZ1 485 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 ANO7Q6IWH7 933 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 SYT12Q8IV01 421 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 UROC1Q96N76 676 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 CAMK1GQ96NX5 476 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 FAM83CQ9BQN1 747 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 ATXN3LQ9H3M9 355 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 THG1LQ9NWX6 298 aaKnown RBP15.33■□□□□ 0.04
ATG9A-220ENST00000475339 USP20Q9Y2K6 914 aa15.33■□□□□ 0.04
ATG9A-220ENST00000475339 CFIP05156 583 aa15.32■□□□□ 0.04
ATG9A-220ENST00000475339 SYT1P21579 422 aa15.32■□□□□ 0.04
ATG9A-220ENST00000475339 SOX4Q06945 474 aaPredicted RBP15.32■□□□□ 0.04
ATG9A-220ENST00000475339 TRIP6Q15654 476 aaKnown RBP15.32■□□□□ 0.04
ATG9A-220ENST00000475339 HAUS3Q68CZ6 603 aa15.32■□□□□ 0.04
ATG9A-220ENST00000475339 SLC23A3Q6PIS1 610 aa15.32■□□□□ 0.04
ATG9A-220ENST00000475339 ZNF843Q8N446 348 aa15.32■□□□□ 0.04
ATG9A-220ENST00000475339 EZH1Q92800 747 aaPredicted RBP15.32■□□□□ 0.04
ATG9A-220ENST00000475339 POLR3CQ9BUI4 534 aaPredicted RBP15.32■□□□□ 0.04
ATG9A-220ENST00000475339 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms