RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 KRT6CP48668 564 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 LACTBP83111 547 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 DNAJC3Q13217 504 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ITGA9Q13797 1035 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 STAT4Q14765 748 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 GSTA3Q16772 222 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ZCWPW2Q504Y3 356 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ZBTB41Q5SVQ8 909 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ARMC4Q5T2S8 1044 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 CYP4A22Q5TCH4 519 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 METTL11BQ5VVY1 283 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 DCAF15Q66K64 600 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 KCTD16Q68DU8 428 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 PPP4R4Q6NUP7 873 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 FAM173BQ6P4H8 233 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 RASGRP2Q7LDG7 609 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 FGD2Q7Z6J4 655 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ADAT2Q7Z6V5 191 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 HACE1Q8IYU2 909 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 NOA1Q8NC60 698 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 DDHD1Q8NEL9 900 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 MDM1Q8TC05 714 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 CCT8L2Q96SF2 557 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 RIOK1Q9BRS2 568 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 GLT8D2Q9H1C3 349 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 FBRSQ9HAH7 460 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 SCPEP1Q9HB40 452 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 JPH1Q9HDC5 661 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 FANCFQ9NPI8 374 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ARHGEF38Q9NXL2 777 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 EMC3Q9P0I2 261 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 DLGAP2Q9P1A6 1054 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 TRIM10Q9UDY6 481 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 ZC3H7BQ9UGR2 993 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 CDC23Q9UJX2 597 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 RIMKLBQ9ULI2 386 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 RABGAP1Q9Y3P9 1069 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 NFE2L3Q9Y4A8 694 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 HEY1Q9Y5J3 304 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 NOX1Q9Y5S8 564 aa6.35□□□□□ -1.39
ECHDC1-215ENST00000475319 KDM5AP29375 1690 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 DAPK1P53355 1430 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 PTPN23Q9H3S7 1636 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 LMTK2Q8IWU2 1503 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 SPATA31A6Q5VVP1 1343 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 RPRD2Q5VT52 1461 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CTAGE15A4D2H0 777 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 VPS37CA5D8V6 355 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 C5orf60A6NFR6 353 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 SNTNA6NMZ2 147 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 FADS2P1A8MWK0 482 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 ARHGAP6O43182 974 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 EXTL3O43909 919 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 AOC2O75106 756 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CLEC3AO75596 197 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 PDE5AO76074 875 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 BAIAP3O94812 1187 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 DLGAP3O95886 979 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 KRT18P05783 430 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CTAGE8P0CG41 777 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CHRNB1P11230 501 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 GZMAP12544 262 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 POU3F2P20265 443 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CFL1P23528 166 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CBX5P45973 191 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 HAAOP46952 286 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 MAPKAPK2P49137 400 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 AP3M2P53677 418 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 VSNL1P62760 191 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 UBXN1Q04323 297 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 STK3Q13188 491 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 DCTN2Q13561 401 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 GNA13Q14344 377 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 KPNB1Q14974 876 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 EPHA7Q15375 998 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 DHCR24Q15392 516 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CNPY1Q3B7I2 92 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 TRAPPC3LQ5T215 181 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 C10orf62Q5T681 223 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 ZBTB37Q5TC79 503 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 RNF219Q5W0B1 726 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 TSHZ3Q63HK5 1081 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 KIAA1841Q6NSI8 718 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 ZNF600Q6ZNG1 722 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CTAGE6Q86UF2 777 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CTAGE4Q8IX94 777 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 MRPL41Q8IXM3 137 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 SCYL3Q8IZE3 742 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CACNA2D3Q8IZS8 1091 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CADM3Q8N126 398 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 ANKRD53Q8N9V6 530 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 PPFIBP2Q8ND30 876 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 BAHD1Q8TBE0 780 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 FNDC8Q8TC99 324 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 OSCP1Q8WVF1 389 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 RSAD2Q8WXG1 361 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 CCDC74BQ96LY2 380 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms