RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 INPP5AQ14642 412 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 FAM162AQ96A26 154 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 PARK7Q99497 189 aaKnown RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 ZNF556Q9HAH1 456 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 KCNH7Q9NS40 1196 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 SPASTQ9UBP0 616 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 RFX7Q2KHR2 1363 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 EFCAB14O75071 495 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 RPS6P62753 249 aaKnown RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 JMJD4Q9H9V9 463 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 KLC4Q9NSK0 619 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 FBXO28Q9NVF7 368 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 UVRAGQ9P2Y5 699 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 KRT87PA6NCN2 255 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 H0Y626 953 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 RAD51CO43502 376 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 ENDOD1O94919 500 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 IL18RAPO95256 599 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 CELF2O95319 508 aaKnown RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 RALBP11234 206 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 GPD1P21695 349 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 MZF1P28698 734 aaPredicted RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 THPOP40225 353 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 MDH1P40925 334 aaKnown RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 CDC42EP1Q00587 391 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 PWP1Q13610 501 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 SYDE1Q6ZW31 735 aaPredicted RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 GPRC5AQ8NFJ5 357 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 TMEM8AQ9HCN3 771 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 PSMC3IPQ9P2W1 217 aaPredicted RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 TFRCP02786 760 aaKnown RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 TCF7P36402 384 aaPredicted RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 NBPF20Q3BBV1 942 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 LVRNQ6Q4G3 990 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 WDCPQ9H6R7 721 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 CDYLQ9Y232 598 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 EXTL3O43909 919 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 CAND2O75155 1236 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 POLBP06746 335 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 NAB2Q15742 525 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 CHSY1Q86X52 802 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 KAT2BQ92831 832 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 TAAR1Q96RJ0 339 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 MTA3Q9BTC8 594 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.45□□□□□ -0.58
VAPB-204ENST00000475243 RHOBTB3O94955 611 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 FAM200BP0CF97 657 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 RASA1P20936 1047 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 DEPDC1Q5TB30 811 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 NOTUMQ6P988 496 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 SLC38A7Q9NVC3 462 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 LZTS1Q9Y250 596 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 ARL2BPQ9Y2Y0 163 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 DDX5P17844 614 aaKnown RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 ITIH2P19823 946 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 TRADDQ15628 312 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PHF21AQ96BD5 680 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 EPN3Q9H201 632 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 KCNF1Q9H3M0 494 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 SLC39A10Q9ULF5 831 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 KDM6AO15550 1401 aaPredicted RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 CFAP73A6NFT4 308 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 FAM47DPA6NHR8 397 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PTPN7P35236 360 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PLA2G4AP47712 749 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 MFSD4BQ5TF39 518 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 TTC39BQ5VTQ0 682 aaPredicted RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 PPP2R3CQ969Q6 453 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 AP3B1O00203 1094 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ARHGEF9O43307 516 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 TRIM16O95361 564 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ITGA8P53708 1063 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 HUNKP57058 714 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 GRIN1Q05586 938 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 RASGRP2Q7LDG7 609 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PRPF39Q86UA1 669 aaKnown RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 ZNF473Q8WTR7 871 aaKnown RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PKD2L2Q9NZM6 624 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 IGSF9BQ9UPX0 1349 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 MAGEA4P43358 317 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 FUT11Q495W5 492 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 TRIM60Q495X7 471 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 E4F1Q66K89 784 aaPredicted RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 FEZF2Q8TBJ5 459 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 HASPINQ8TF76 798 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 EME1Q96AY2 570 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ATG4CQ96DT6 458 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ZMAT2Q96NC0 199 aaKnown RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 EHD2Q9NZN4 543 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ZNF711Q9Y462 761 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 DTNAQ9Y4J8 743 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PCDHB2Q9Y5E7 798 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PITPNM2Q9BZ72 1349 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 PCSK1P29120 753 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 MAP3K10Q02779 954 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 KYNUQ16719 465 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 SDE2Q6IQ49 451 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms