RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 WDFY4Q6ZS81 3184 aa8.46□□□□□ -1.05
CCDC93-208ENST00000474546 ARHGEF35A5YM69 484 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 BTBD19C9JJ37 291 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 BACH1O14867 736 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ZNF189O75820 626 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ITGB8P26012 769 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 GJA8P48165 433 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 GPC3P51654 580 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 DSG1Q02413 1049 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ZBTB16Q05516 673 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ZNF211Q13398 564 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 SIX1Q15475 284 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 TMEM259Q4ZIN3 620 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 PRR16Q569H4 304 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ODR4Q5SWX8 454 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 SNX30Q5VWJ9 437 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 IZUMO3Q5VZ72 239 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ATG16L1Q676U5 607 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 LRRC74BQ6ZQY2 392 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 NIPA1Q7RTP0 329 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 NLRP9Q7RTR0 991 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 GSTA5Q7RTV2 222 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 CLNKQ7Z7G1 428 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 FBXO11Q86XK2 927 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 TMEM126BQ8IUX1 230 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 KIF2BQ8N4N8 673 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 CD99L2Q8TCZ2 262 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 C10orf82Q8WW14 230 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 PSPC1Q8WXF1 523 aaKnown RBP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 NCSTNQ92542 709 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 FAM136AQ96C01 138 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ARHGEF26Q96DR7 871 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 RMDN2Q96LZ7 410 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 RIT2Q99578 217 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 HSD17B14Q9BPX1 270 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 DDX23Q9BUQ8 820 aaKnown RBP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 MRIQ9BWK5 157 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 UBE2OQ9C0C9 1292 aaKnown RBP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 WWP1Q9H0M0 922 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 KCNH6Q9H252 994 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 RANBP17Q9H2T7 1088 aaKnown RBP8.46□□□□□ -1.06
CCDC93-208ENST00000474546 TMEM8AQ9HCN3 771 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 POLD4Q9HCU8 107 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 MRGBPQ9NV56 204 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 HACD3Q9P035 362 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 ITGB1BP2Q9UKP3 347 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 COG5Q9UP83 839 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 CHKBQ9Y259 395 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 C2CD2Q9Y426 696 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 IKBKGQ9Y6K9 419 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 CLUHO75153 1309 aa8.46□□□□□ -1.06
CCDC93-208ENST00000474546 DPPA5A6NC42 116 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 I3L4J1 428 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 FOXN3O00409 490 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 DNALI1O14645 258 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 ALOX15BO15296 676 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 BBOX1O75936 387 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 PROSCO94903 275 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 LYPLA2O95372 231 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 PSMG1O95456 288 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 ESRRAP11474 423 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 MYL4P12829 197 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 IBSPP21815 317 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 HOXD13P35453 343 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 NSFP46459 744 aaKnown RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 CASP5P51878 434 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 ARL4CP56559 192 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 LRRC14Q15048 493 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 TMED2Q15363 201 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 ARHGAP44Q17R89 818 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 QRICH1Q2TAL8 776 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 GNPTABQ3T906 1256 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 EFHC2Q5JST6 749 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 C4orf22Q6V702 233 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 PASD1Q8IV76 773 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 CATSPER1Q8NEC5 780 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 OLIG1Q8TAK6 271 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 LMO3Q8TAP4 145 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 GDAP1Q8TB36 358 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 FAM81AQ8TBF8 368 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 MYLIPQ8WY64 445 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 OPTNQ96CV9 577 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 SLC7A6OSQ96CW6 309 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 STRA6Q9BX79 667 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 IQCGQ9H095 443 aaKnown RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 KIAA1683Q9H0B3 1180 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 PCDH9Q9HC56 1237 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 CYLDQ9NQC7 956 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 RAB20Q9NX57 234 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 CHCHD3Q9NX63 227 aaKnown RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 ZDHHC7Q9NXF8 308 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 NDE1Q9NXR1 346 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 KCNK4Q9NYG8 393 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 PLK2Q9NYY3 685 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 DLGAP2Q9P1A6 1054 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 IP6K2Q9UHH9 426 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 TCEAL9Q9UHQ7 104 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms