RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PCDHB15Q9Y5E8 787 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 LRRD1A4D1F6 860 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PGPEP1LA6NFU8 196 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 H0YIV9 168 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PPEF2O14830 753 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CA12O43570 354 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DNAJB5O75953 348 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 RECQL4O94761 1208 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PLATP00750 562 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CALM1P0DP23 149 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CALM2P0DP24 149 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CALM3P0DP25 149 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CHN1P15882 459 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ME1P48163 572 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ARCN1P48444 511 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 ABATP80404 500 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 NR1D2Q14995 579 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 VEPH1Q14D04 833 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 NCAPHQ15003 741 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ABCB5Q2M3G0 1257 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 SLC44A4Q53GD3 710 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 TMEM67Q5HYA8 995 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 IL23RQ5VWK5 629 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 LBX2Q6XYB7 198 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ZNF783Q6ZMS7 281 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PIWIL3Q7Z3Z3 882 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 ERICH1Q86X53 443 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ANKMY2Q8IV38 441 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CRYBG2Q8N1P7 616 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PLD6Q8N2A8 252 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 SIMC1Q8NDZ2 872 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 EXD1Q8NHP7 514 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 RIN3Q8TB24 985 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ZSCAN18Q8TBC5 510 aaPredicted RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 ENKURQ8TC29 256 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 SH3RF3Q8TEJ3 882 aaPredicted RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 GANCQ8TET4 914 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 GRK7Q8WTQ7 553 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 FAM216AQ8WUB2 273 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PPP1R16BQ96T49 567 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PRRX2Q99811 253 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 TTYH3Q9C0H2 523 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 NINJ2Q9NZG7 142 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CNOT11Q9UKZ1 510 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 DENND2AQ9ULE3 1009 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DNM3Q9UQ16 869 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 NFE2L3Q9Y4A8 694 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 FADS3Q9Y5Q0 445 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DMRT1Q9Y5R6 373 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ATP8B3O60423 1300 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 IGSF1Q8N6C5 1336 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 TYW5A2RUC4 315 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 SNTNA6NMZ2 147 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 GOLGA8CPA6NN73 597 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 M0R2N6 131 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 SLC25A17O43808 307 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CHGBP05060 677 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ASNSP08243 561 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PRR35P0CG20 571 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PDE6AP16499 860 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 IL15P40933 162 aaPredicted RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 EEF1A1P68104 462 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 LACTBP83111 547 aaPredicted RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 EEF1A2Q05639 463 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 NFIL3Q16649 462 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PTPN21Q16825 1174 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DDR2Q16832 855 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 EEF1A1P5Q5VTE0 462 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 IQSEC1Q6DN90 963 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 SLC30A10Q6XR72 485 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 C16orf59Q7L2K0 433 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CMIPQ8IY22 773 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CCDC36Q8IYA8 594 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 GMCL1P1Q8NEA9 526 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 OR10Z1Q8NGY1 313 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CFAP61Q8NHU2 1237 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 TMEM40Q8WWA1 233 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 MAIP1Q8WWC4 291 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 VWCEQ96DN2 955 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 EYA3Q99504 573 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 FRMD8Q9BZ67 464 aaPredicted RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 LRRC19Q9H756 370 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PFDN4Q9NQP4 134 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CYP26B1Q9NR63 512 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 RXFP3Q9NSD7 469 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 NSMCE4AQ9NXX6 385 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DTLQ9NZJ0 730 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 NAALAD2Q9Y3Q0 740 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 TRPV2Q9Y5S1 764 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 KIF7Q2M1P5 1343 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 SH3TC1Q8TE82 1336 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 TRBV23OR9-2A0A075B6M9 112 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 A6NLC8 198 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 SPECC1L-ADORA2AF8WAN1 911 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 BACH1O14867 736 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 IFIT3O14879 490 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 NDUFA2O43678 99 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ARHGEF15O94989 841 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 SERPINF2P08697 491 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms