RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 A0A1W2PQ64 194 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 A0A1W2PQD8 194 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 CFHP08603 1231 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 PRR29P0C7W0 189 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 PLA2G5P39877 138 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 SNRPFP62306 86 aaKnown RBP19.32■□□□□ 0.68
UPF3A-203ENST00000474056 BFSP1Q12934 665 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 SURF1Q15526 300 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 SNRNP35Q16560 246 aaKnown RBP19.32■□□□□ 0.68
UPF3A-203ENST00000474056 KNOP1Q1ED39 458 aaKnown RBP19.32■□□□□ 0.68
UPF3A-203ENST00000474056 SLC39A12Q504Y0 691 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 HS2ST1Q7LGA3 356 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 LRRC52Q8N7C0 313 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 XXYLT1Q8NBI6 393 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 MCRS1Q96EZ8 462 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 ZNF512Q96ME7 567 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-203ENST00000474056 DNAJC25Q9H1X3 360 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 FBXL21Q9UKT6 434 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 L1RE1Q9UN81 338 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 SLC27A5Q9Y2P5 690 aa19.32■□□□□ 0.68
UPF3A-203ENST00000474056 PTPRDP23468 1912 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 NUP210Q8TEM1 1887 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-203ENST00000474056 SOAT2O75908 522 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 SRFP11831 508 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 AVPR2P30518 371 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 RBP5P82980 135 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 CYP24A1Q07973 514 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 CWF19L1Q69YN2 538 aaKnown RBP19.31■□□□□ 0.68
UPF3A-203ENST00000474056 IQCEQ6IPM2 695 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 MTSS1LQ765P7 747 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 PDZD4Q76G19 769 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-203ENST00000474056 LRRTM3Q86VH5 581 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 THEM5Q8N1Q8 247 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 PDCL2Q8N4E4 241 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 PRSS33Q8NF86 280 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 FAM122AQ96E09 287 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 KXD1Q9BQD3 176 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 KCNH6Q9H252 994 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 MFSD1Q9H3U5 465 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 ZNF638Q14966 1978 aaKnown RBP19.31■□□□□ 0.68
UPF3A-203ENST00000474056 MIA3Q5JRA6 1907 aa19.31■□□□□ 0.68
UPF3A-203ENST00000474056 MOSPD3O75425 235 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 TNNC2P02585 160 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 MYL1P05976 194 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 DLATP10515 647 aaKnown RBP19.3■□□□□ 0.68
UPF3A-203ENST00000474056 MYL4P12829 197 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 EPHA5P54756 1037 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 PSMD2Q13200 908 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 PLD1Q13393 1074 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 WDR49Q8IV35 697 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 C12orf56Q8IXR9 622 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 SIX5Q8N196 739 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 GPR152Q8TDT2 470 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 CGRRF1Q99675 332 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 ASAH2Q9NR71 780 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 GDE1Q9NZC3 331 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 CGNQ9P2M7 1197 aaKnown RBP19.3■□□□□ 0.68
UPF3A-203ENST00000474056 CA14Q9ULX7 337 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 SNX9Q9Y5X1 595 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 COL4A3Q01955 1670 aa19.3■□□□□ 0.68
UPF3A-203ENST00000474056 KRBA1A5PL33 1030 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 ZNF197O14709 1029 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 HUS1O60921 280 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 RPN1P04843 607 aaKnown RBP19.29■□□□□ 0.68
UPF3A-203ENST00000474056 GJA1P17302 382 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 NPR3P17342 541 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 PSMD6Q15008 389 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 DUOXA2Q1HG44 320 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 CYP4A22Q5TCH4 519 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 KRBA2Q6ZNG9 492 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 OSTM1Q86WC4 334 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 TMC8Q8IU68 726 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 TMEM105Q8N8V8 129 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 FLCNQ8NFG4 579 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 LRRC3Q9BY71 257 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 GZF1Q9H116 711 aaPredicted RBP19.29■□□□□ 0.68
UPF3A-203ENST00000474056 SLC2A4RGQ9NR83 387 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 GDAP2Q9NXN4 497 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 WNT16Q9UBV4 365 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 GREB1Q4ZG55 1949 aa19.29■□□□□ 0.68
UPF3A-203ENST00000474056 TICRRQ7Z2Z1 1910 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 MICAL2O94851 1124 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 ZNF202O95125 648 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 TNNI1P19237 187 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 ALDH1A3P47895 512 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 EPHB3P54753 998 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 GPC5P78333 572 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 NUCB2P80303 420 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 DPYDQ12882 1025 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 ASTLQ6HA08 431 aaPredicted RBP19.28■□□□□ 0.68
UPF3A-203ENST00000474056 TRAPPC11Q7Z392 1133 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 LEMD2Q8NC56 503 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 SHKBP1Q8TBC3 707 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 SPPL2BQ8TCT7 592 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 PLEKHO2Q8TD55 490 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 CCDC127Q96BQ5 260 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 FNBP1Q96RU3 617 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 SEPT5Q99719 369 aaPredicted RBP19.28■□□□□ 0.68
UPF3A-203ENST00000474056 LPIN3Q9BQK8 851 aa19.28■□□□□ 0.68
UPF3A-203ENST00000474056 PLA2G2FQ9BZM2 168 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms