RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 DUSP4Q13115 394 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 PLD1Q13393 1074 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 ISM2Q6H9L7 571 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 ADGRF2Q8IZF7 708 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 OR10T2Q8NGX3 314 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 PARD3BQ8TEW8 1205 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 TMEM174Q8WUU8 243 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 TMEM209Q96SK2 561 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 HCFC1R1Q9NWW0 138 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 DDX43Q9NXZ2 648 aaKnown RBP15.27■□□□□ 0.04
VAMP4-203ENST00000474047 L1RE1Q9UN81 338 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 SLC27A5Q9Y2P5 690 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 POU2F2P09086 479 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 PSMC2P35998 433 aaKnown RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 LHX1P48742 406 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 EPHB3P54753 998 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 TNNC1P63316 161 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 FAM186BQ8IYM0 893 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 ATAD1Q8NBU5 361 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 CXorf38Q8TB03 319 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 TMC2Q8TDI7 906 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 ZNF516Q92618 1163 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 CORO1BQ9BR76 489 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 ZCWPW1Q9H0M4 648 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 DNMT3BQ9UBC3 853 aaKnown RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 MRPS23Q9Y3D9 190 aaKnown RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 VCANP13611 3396 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 LRRIQ3A6PVS8 624 aaPredicted RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 CETN3O15182 167 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 CST3P01034 146 aaPredicted RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 ASGR2P07307 311 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 PCSK1P29120 753 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 TUFMP49411 452 aaKnown RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 VAMP7P51809 220 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 CDR1P51861 262 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 SMARCB1Q12824 385 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 NFIL3Q16649 462 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 EDRF1Q3B7T1 1238 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 WDR72Q3MJ13 1102 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 TMEM31Q5JXX7 168 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 CYP4A22Q5TCH4 519 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 CENPPQ6IPU0 288 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 INTS8Q75QN2 995 aaKnown RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 MYADMQ96S97 322 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 SEPT5Q99719 369 aaPredicted RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 SORCS3Q9UPU3 1222 aa15.26■□□□□ 0.03
VAMP4-203ENST00000474047 ZFP37Q9Y6Q3 630 aaPredicted RBP15.26■□□□□ 0.03
VAMP4-203ENST00000474047 C5orf42Q9H799 3197 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 MTMR11A4FU01 709 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 FAM86C2PA6NEL3 165 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 ZNF197O14709 1029 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 PSMA7O14818 248 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 MAPK13O15264 365 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 RHOP08100 348 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 ATICP31939 592 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 MYL6P60660 151 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 TAF12Q16514 161 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 SOWAHAQ2M3V2 549 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 MGAT5BQ3V5L5 792 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 PDZD4Q76G19 769 aaPredicted RBP15.25■□□□□ 0.03
VAMP4-203ENST00000474047 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 SPATA18Q8TC71 538 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 PLEKHO2Q8TD55 490 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 C2orf15Q8WU43 125 aaKnown RBP15.25■□□□□ 0.03
VAMP4-203ENST00000474047 EDAQ92838 391 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 ACBD6Q9BR61 282 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 SNX25Q9H3E2 840 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 ABI2Q9NYB9 513 aaPredicted RBP15.25■□□□□ 0.03
VAMP4-203ENST00000474047 NXF1Q9UBU9 619 aaKnown RBP15.25■□□□□ 0.03
VAMP4-203ENST00000474047 MAN1B1Q9UKM7 699 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 YIPF1Q9Y548 306 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 PCDHB5Q9Y5E4 795 aa15.25■□□□□ 0.03
VAMP4-203ENST00000474047 DENND4AQ7Z401 1863 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 MYO10Q9HD67 2058 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 BIN1O00499 593 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 IKBKBO14920 756 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 AKAP3O75969 853 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 EPB41P11171 864 aaKnown RBP15.24■□□□□ 0.03
VAMP4-203ENST00000474047 MYL4P12829 197 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 LAMP2P13473 410 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 ACAT1P24752 427 aaKnown RBP15.24■□□□□ 0.03
VAMP4-203ENST00000474047 PPP1R2P41236 205 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 DLG4P78352 724 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 ZXDAP98168 799 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 NCOA4Q13772 614 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 VEPH1Q14D04 833 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 NFE2Q16621 373 aaPredicted RBP15.24■□□□□ 0.03
VAMP4-203ENST00000474047 TDRD10Q5VZ19 366 aaKnown RBP15.24■□□□□ 0.03
VAMP4-203ENST00000474047 SPPL2BQ8TCT7 592 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 ING5Q8WYH8 240 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 IPO9Q96P70 1041 aaKnown RBP15.24■□□□□ 0.03
VAMP4-203ENST00000474047 RTP3Q9BQQ7 232 aa15.24■□□□□ 0.03
VAMP4-203ENST00000474047 ASAH2Q9NR71 780 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms