RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ZNF806P0C7X5 589 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 C1QTNF9P0C862 333 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 HMGA1P17096 107 aaKnown RBP10.46□□□□□ -0.73
MCF2L-223ENST00000473345 LIMK1P53667 647 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 SLC12A3P55017 1021 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 LILRA4P59901 499 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 SHC2P98077 582 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 LRRC32Q14392 662 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 ANKRD1Q15327 319 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 TMEM196Q5HYL7 178 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 DGKKQ5KSL6 1271 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 SDHAF4Q5VUM1 108 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 HAUS3Q68CZ6 603 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 CEP68Q76N32 757 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 LEMD2Q8NC56 503 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 GIPC2Q8TF65 315 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 SPIRE2Q8WWL2 714 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 GAB3Q8WWW8 586 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 USP13Q92995 863 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-223ENST00000473345 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 CHAMP1Q96JM3 812 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 C8orf76Q96K31 380 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 SENP8Q96LD8 212 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 HHIPQ96QV1 700 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 FIZ1Q96SL8 496 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 FOXP1Q9H334 677 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-223ENST00000473345 EBF3Q9H4W6 596 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 GKN1Q9NS71 199 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 MAFFQ9ULX9 164 aa10.46□□□□□ -0.73
MCF2L-223ENST00000473345 NUP210Q8TEM1 1887 aaPredicted RBP10.46□□□□□ -0.74
MCF2L-223ENST00000473345 CITO14578 2027 aa10.46□□□□□ -0.74
MCF2L-223ENST00000473345 CHD6Q8TD26 2715 aa10.46□□□□□ -0.74
MCF2L-223ENST00000473345 GREB1Q4ZG55 1949 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 ANO9A1A5B4 782 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 HCRTO43612 131 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 RPP40O75818 363 aaKnown RBP10.45□□□□□ -0.74
MCF2L-223ENST00000473345 KCNK5O95279 499 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 F11P03951 625 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 CHRM1P11229 460 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-223ENST00000473345 PLS3P13797 630 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 GUCY2CP25092 1073 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 CNR2P34972 360 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 EPHB3P54753 998 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 PLD1Q13393 1074 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 TRIM29Q14134 588 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 PDIA5Q14554 519 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 PPP2R5DQ14738 602 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 AASDHQ4L235 1098 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-223ENST00000473345 ARHGAP29Q52LW3 1261 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 HYIQ5T013 277 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 SPATA1Q5VX52 437 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 C9orf57Q5W0N0 161 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 OVOS1Q6IE37 1185 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 JADE1Q6IE81 842 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 YAF2Q8IY57 180 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 ZSWIM2Q8NEG5 633 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 BPIFB1Q8TDL5 484 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 SLC22A12Q96S37 553 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 KIF2CQ99661 725 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 LSM14BQ9BX40 385 aaKnown RBP10.45□□□□□ -0.74
MCF2L-223ENST00000473345 ZCWPW1Q9H0M4 648 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 DUSP15Q9H1R2 295 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-223ENST00000473345 TASP1Q9H6P5 420 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 FOXD4L1Q9NU39 408 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 ANGPTL2Q9UKU9 493 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 INVSQ9Y283 1065 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 RBM19Q9Y4C8 960 aaKnown RBP10.45□□□□□ -0.74
MCF2L-223ENST00000473345 SPEGQ15772 3267 aa10.45□□□□□ -0.74
MCF2L-223ENST00000473345 ANK1P16157 1881 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 SDK1Q7Z5N4 2213 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 OR6C75A6NL08 312 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 ANKRD63C9JTQ0 380 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 PIRO00625 290 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 RNF40O75150 1001 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 CLTAP09496 248 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 TYMPP19971 482 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 CYP3A5P20815 502 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 MARCKSP29966 332 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 NCKAP1LP55160 1127 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 ORC2Q13416 577 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 MYBPC2Q14324 1141 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 PLK5Q496M5 336 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 SLC39A12Q504Y0 691 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 TXNDC8Q6A555 127 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 ZPBP2Q6X784 338 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 APBB1IPQ7Z5R6 666 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 SFTPA1Q8IWL2 248 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 SYT2Q8N9I0 419 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 E2F7Q96AV8 911 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 MSANTD3Q96H12 275 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 DRC1Q96MC2 740 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 SEPT5Q99719 369 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 GPR88Q9GZN0 384 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 OBP2AQ9NY56 170 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 CPSF3Q9UKF6 684 aaKnown RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 UBQLN1Q9UMX0 589 aaKnown RBP10.44□□□□□ -0.74
MCF2L-223ENST00000473345 DNM3Q9UQ16 869 aa10.44□□□□□ -0.74
MCF2L-223ENST00000473345 A0A0B4J269 797 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 PATE3B3GLJ2 98 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms