RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 SPATA1Q5VX52 437 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 C9orf57Q5W0N0 161 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
ACTB-209ENST00000473257 LRRTM3Q86VH5 581 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 ZSWIM2Q8NEG5 633 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 FAM200AQ8TCP9 573 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 TIPINQ9BVW5 301 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 PLEKHA5Q9HAU0 1116 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 GMEB2Q9UKD1 530 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 KIF26AQ9ULI4 1882 aaPredicted RBP12.16□□□□□ -0.46
ACTB-209ENST00000473257 TSC2P49815 1807 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 CHD6Q8TD26 2715 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 A0A0B4J269 797 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.15□□□□□ -0.46
ACTB-209ENST00000473257 CHADO15335 359 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 EXTL3O43909 919 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 FAM13AO94988 1023 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 PLCG1P19174 1290 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 GJB2P29033 226 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 CTHP32929 405 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 CCR3P51677 355 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 WNT7BP56706 349 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 LMNB2Q03252 620 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 FCHO2Q0JRZ9 810 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 SIM2Q14190 667 aaPredicted RBP12.15□□□□□ -0.46
ACTB-209ENST00000473257 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 RILPL1Q5EBL4 403 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 SDHAF4Q5VUM1 108 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 WSCD1Q658N2 575 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 TRIM68Q6AZZ1 485 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 USP49Q70CQ1 688 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 RIN3Q8TB24 985 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
ACTB-209ENST00000473257 PSMG2Q969U7 264 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 FIZ1Q96SL8 496 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 IL21Q9HBE4 155 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 TRPV5Q9NQA5 729 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 TMLHEQ9NVH6 421 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 CPSF3Q9UKF6 684 aaKnown RBP12.15□□□□□ -0.46
ACTB-209ENST00000473257 RAB23Q9ULC3 237 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 CCL26Q9Y258 94 aa12.15□□□□□ -0.46
ACTB-209ENST00000473257 MYBPHLA2RUH7 354 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 OTOL1A6NHN0 477 aaPredicted RBP12.14□□□□□ -0.47
ACTB-209ENST00000473257 H3BQV1 296 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 DPYSL4O14531 572 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 KRT18P05783 430 aaKnown RBP12.14□□□□□ -0.47
ACTB-209ENST00000473257 ODC1P11926 461 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 TYMPP19971 482 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 CYP3A5P20815 502 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 MYBPC2Q14324 1141 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 TMEM132DQ14C87 1099 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 LAIR1Q6GTX8 287 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 ARMCX5Q6P1M9 558 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 SPEM1Q8N4L4 309 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 LEMD2Q8NC56 503 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 TTC16Q8NEE8 873 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 TMX3Q96JJ7 454 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 PYM1Q9BRP8 204 aaKnown RBP12.14□□□□□ -0.47
ACTB-209ENST00000473257 SLC46A2Q9BY10 475 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 FAM126AQ9BYI3 521 aaPredicted RBP12.14□□□□□ -0.47
ACTB-209ENST00000473257 SMOC1Q9H4F8 434 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 ABI2Q9NYB9 513 aaPredicted RBP12.14□□□□□ -0.47
ACTB-209ENST00000473257 LARSQ9P2J5 1176 aaKnown RBP12.14□□□□□ -0.47
ACTB-209ENST00000473257 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 ZFHX4Q86UP3 3567 aa12.14□□□□□ -0.47
ACTB-209ENST00000473257 ANO9A1A5B4 782 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 PIRO00625 290 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 CYB561D2O14569 222 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 HCRTO43612 131 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 TRAK2O60296 914 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 PIGRP01833 764 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 ADRB2P07550 413 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 ARSAP15289 507 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 NRLP54845 237 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 KCNA1Q09470 495 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 SF3A2Q15428 464 aaKnown RBP12.13□□□□□ -0.47
ACTB-209ENST00000473257 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
ACTB-209ENST00000473257 TMEM150AQ86TG1 271 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 EFCAB13Q8IY85 973 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 CELF5Q8N6W0 485 aaKnown RBP12.13□□□□□ -0.47
ACTB-209ENST00000473257 RAD54LQ92698 747 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 CHFRQ96EP1 664 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 ZCWPW1Q9H0M4 648 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 PARVGQ9HBI0 331 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 FBRSL1Q9HCM7 1045 aaKnown RBP12.13□□□□□ -0.47
ACTB-209ENST00000473257 GKN1Q9NS71 199 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 RXFP3Q9NSD7 469 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 SEMA4GQ9NTN9 838 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 TBC1D7Q9P0N9 293 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 RALGAPA1Q6GYQ0 2036 aa12.13□□□□□ -0.47
ACTB-209ENST00000473257 PRR5-ARHGAP8B1AHC4 643 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 AXIN1O15169 862 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 RETP07949 1114 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 UBA7P41226 1012 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 ZNF131P52739 623 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 ARHGAP8P85298 464 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 LRRC32Q14392 662 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 PPM1JQ5JR12 505 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 CRELD2Q6UXH1 353 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms