RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SIRT5Q9NXA8 310 aa4.01□□□□□ -1.77
XRN1-209ENST00000472625 HDAC6Q9UBN7 1215 aa4.01□□□□□ -1.77
XRN1-209ENST00000472625 FBXL7Q9UJT9 491 aa4.01□□□□□ -1.77
XRN1-209ENST00000472625 MTUS1Q9ULD2 1270 aa4.01□□□□□ -1.77
XRN1-209ENST00000472625 PCDHA1Q9Y5I3 950 aa4.01□□□□□ -1.77
XRN1-209ENST00000472625 BACE2Q9Y5Z0 518 aa4.01□□□□□ -1.77
XRN1-209ENST00000472625 NCANO14594 1321 aa4□□□□□ -1.77
XRN1-209ENST00000472625 NEDD4P46934 1319 aa4□□□□□ -1.77
XRN1-209ENST00000472625 FRMPD4Q14CM0 1322 aa4□□□□□ -1.77
XRN1-209ENST00000472625 ADGRA3Q8IWK6 1321 aa4□□□□□ -1.77
XRN1-209ENST00000472625 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4□□□□□ -1.77
XRN1-209ENST00000472625 LCHNA4D1U4 455 aa4□□□□□ -1.77
XRN1-209ENST00000472625 C7orf72A4D263 438 aa4□□□□□ -1.77
XRN1-209ENST00000472625 C2orf71A6NGG8 1288 aa4□□□□□ -1.77
XRN1-209ENST00000472625 EPOPA6NHQ4 379 aa4□□□□□ -1.77
XRN1-209ENST00000472625 KLRF2D3W0D1 207 aa4□□□□□ -1.77
XRN1-209ENST00000472625 FOXP2O15409 715 aa4□□□□□ -1.77
XRN1-209ENST00000472625 MAFGO15525 162 aa4□□□□□ -1.77
XRN1-209ENST00000472625 LPXNO60711 386 aa4□□□□□ -1.77
XRN1-209ENST00000472625 PPM1BO75688 479 aa4□□□□□ -1.77
XRN1-209ENST00000472625 KCNH1O95259 989 aa4□□□□□ -1.77
XRN1-209ENST00000472625 ARIH2O95376 493 aa4□□□□□ -1.77
XRN1-209ENST00000472625 LGALS2P05162 132 aa4□□□□□ -1.77
XRN1-209ENST00000472625 DBHP09172 617 aa4□□□□□ -1.77
XRN1-209ENST00000472625 GOLGA8HP0CJ92 632 aa4□□□□□ -1.77
XRN1-209ENST00000472625 STAG3L1P0CL83 205 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SMIM10L2AP0DMW4 78 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SMIM10L2BP0DMW5 78 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CALM1P0DP23 149 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CALM2P0DP24 149 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CALM3P0DP25 149 aa4□□□□□ -1.77
XRN1-209ENST00000472625 MYCLP12524 364 aaPredicted RBP4□□□□□ -1.77
XRN1-209ENST00000472625 HOXC8P31273 242 aa4□□□□□ -1.77
XRN1-209ENST00000472625 ICAM3P32942 547 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CTNNB1P35222 781 aa4□□□□□ -1.77
XRN1-209ENST00000472625 GNAQP50148 359 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SLC26A2P50443 739 aa4□□□□□ -1.77
XRN1-209ENST00000472625 RRP1P56182 461 aaKnown RBP4□□□□□ -1.77
XRN1-209ENST00000472625 DEFB103AP81534 67 aa4□□□□□ -1.77
XRN1-209ENST00000472625 UBE3AQ05086 875 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SCRN1Q12765 414 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SMAD4Q13485 552 aaKnown RBP4□□□□□ -1.77
XRN1-209ENST00000472625 GPM6BQ13491 265 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SERINC3Q13530 473 aa4□□□□□ -1.77
XRN1-209ENST00000472625 RAB33AQ14088 237 aa4□□□□□ -1.77
XRN1-209ENST00000472625 PGM5Q15124 567 aa4□□□□□ -1.77
XRN1-209ENST00000472625 EPC2Q52LR7 807 aa4□□□□□ -1.77
XRN1-209ENST00000472625 ZNF618Q5T7W0 954 aa4□□□□□ -1.77
XRN1-209ENST00000472625 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
XRN1-209ENST00000472625 C20orf194Q5TEA3 1177 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CYP2R1Q6VVX0 501 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CATIPQ7Z7H3 387 aa4□□□□□ -1.77
XRN1-209ENST00000472625 TBC1D10CQ8IV04 446 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SUGP1Q8IWZ8 645 aaKnown RBP4□□□□□ -1.77
XRN1-209ENST00000472625 TMEFF1Q8IYR6 380 aa4□□□□□ -1.77
XRN1-209ENST00000472625 Q8N1Y9 231 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CTCFLQ8NI51 663 aaPredicted RBP4□□□□□ -1.77
XRN1-209ENST00000472625 BTN2A2Q8WVV5 523 aa4□□□□□ -1.77
XRN1-209ENST00000472625 P2RX5Q93086 422 aa4□□□□□ -1.77
XRN1-209ENST00000472625 TOP1MTQ969P6 601 aa4□□□□□ -1.77
XRN1-209ENST00000472625 RILPL2Q969X0 211 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CHMP4CQ96CF2 233 aa4□□□□□ -1.77
XRN1-209ENST00000472625 IL17RAQ96F46 866 aa4□□□□□ -1.77
XRN1-209ENST00000472625 FAM227BQ96M60 508 aa4□□□□□ -1.77
XRN1-209ENST00000472625 INPP4AQ96PE3 977 aaPredicted RBP4□□□□□ -1.77
XRN1-209ENST00000472625 UIMC1Q96RL1 719 aa4□□□□□ -1.77
XRN1-209ENST00000472625 MAP3K14Q99558 947 aa4□□□□□ -1.77
XRN1-209ENST00000472625 ALG1Q9BT22 464 aa4□□□□□ -1.77
XRN1-209ENST00000472625 GBP3Q9H0R5 595 aa4□□□□□ -1.77
XRN1-209ENST00000472625 GLT8D2Q9H1C3 349 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CDIP1Q9H305 208 aa4□□□□□ -1.77
XRN1-209ENST00000472625 AZI2Q9H6S1 392 aa4□□□□□ -1.77
XRN1-209ENST00000472625 JMJD4Q9H9V9 463 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CYP26B1Q9NR63 512 aa4□□□□□ -1.77
XRN1-209ENST00000472625 CLDND1Q9NY35 253 aa4□□□□□ -1.77
XRN1-209ENST00000472625 ERAP1Q9NZ08 941 aa4□□□□□ -1.77
XRN1-209ENST00000472625 TCEAL9Q9UHQ7 104 aa4□□□□□ -1.77
XRN1-209ENST00000472625 AKT3Q9Y243 479 aa4□□□□□ -1.77
XRN1-209ENST00000472625 IRAK3Q9Y616 596 aa4□□□□□ -1.77
XRN1-209ENST00000472625 SQORQ9Y6N5 450 aa4□□□□□ -1.77
XRN1-209ENST00000472625 ZNFX1Q9P2E3 1918 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 SMCHD1A6NHR9 2005 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 A0A1W2PQU0 124 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 RRN3P2A6NIE6 340 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 B4E1Z4 1266 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 hCG_1984214I3L0E3 225 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 RFXAPO00287 272 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 PRRG2O14669 202 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 DDAH1O94760 285 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 MMP1P03956 469 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 SDSP20132 328 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 ENDOUP21128 410 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 IGFBP6P24592 240 aaPredicted RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 SMARCA1P28370 1054 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 NDUFV1P49821 464 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 GFRA1P56159 465 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CORO7P57737 925 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CYP4F8P98187 520 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 PPFIA1Q13136 1202 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 BTG3Q14201 252 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms