RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GIPC1O14908 333 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 CHADO15335 359 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 EXTL3O43909 919 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 HIP1RO75146 1068 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 SOAT2O75908 522 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 OR52Z1P0C646 297 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 CDC25AP30304 524 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 RPL9P32969 192 aaKnown RBP10.18□□□□□ -0.78
VCL-204ENST00000472585 CCT6AP40227 531 aaKnown RBP10.18□□□□□ -0.78
VCL-204ENST00000472585 TOB1P50616 345 aaPredicted RBP10.18□□□□□ -0.78
VCL-204ENST00000472585 GUCY2FP51841 1108 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 TNK2Q07912 1038 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 PPP2R5AQ15172 486 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 ZBTB6Q15916 424 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 PLA2G2CQ5R387 149 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 SH3PXD2AQ5TCZ1 1133 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 C1orf186Q6ZWK4 172 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 ARID3BQ8IVW6 561 aaPredicted RBP10.18□□□□□ -0.78
VCL-204ENST00000472585 SYNPOQ8N3V7 929 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 KIFAP3Q92845 792 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 IFT74Q96LB3 600 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 ACAP3Q96P50 834 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 PGLYRP2Q96PD5 576 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 TMEM209Q96SK2 561 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 MMTAG2Q9BU76 263 aaKnown RBP10.18□□□□□ -0.78
VCL-204ENST00000472585 CCDC94Q9BW85 323 aaPredicted RBP10.18□□□□□ -0.78
VCL-204ENST00000472585 SCNM1Q9BWG6 230 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 DDX19AQ9NUU7 478 aaKnown RBP10.18□□□□□ -0.78
VCL-204ENST00000472585 SLC27A5Q9Y2P5 690 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 YIPF1Q9Y548 306 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 NUP205Q92621 2012 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 EML5Q05BV3 1969 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 KIF26AQ9ULI4 1882 aaPredicted RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 CCDC163A0A0D9SF12 145 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 OTOL1A6NHN0 477 aaPredicted RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 SPECC1L-ADORA2AF8WAN1 911 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 M0QZQ0 153 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 SLC16A4O15374 487 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 OAZ2O95190 189 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 NUDT7P0C024 238 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 MCF2P10911 925 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 MUTP22033 750 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 PXNP49023 591 aaPredicted RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 AARSP49588 968 aaKnown RBP eCLIP10.17□□□□□ -0.78
VCL-204ENST00000472585 YARSP54577 528 aaKnown RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 DUSP4Q13115 394 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 CCINQ13939 588 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 PON2Q15165 354 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 CENPPQ6IPU0 288 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 ZNF280DQ6N043 979 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 RINT1Q6NUQ1 792 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 MPZL3Q6UWV2 235 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 HAUS6Q7Z4H7 955 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 RALGPS2Q86X27 583 aaPredicted RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 IGSF22Q8N9C0 903 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 ATAD1Q8NBU5 361 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 LEMD2Q8NC56 503 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 GATA6Q92908 595 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 NTPCRQ9BSD7 190 aaKnown RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 MRPL4Q9BYD3 311 aaKnown RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 GPR88Q9GZN0 384 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 ASAH2Q9NR71 780 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 TOPORSQ9NS56 1045 aaPredicted RBP10.17□□□□□ -0.78
VCL-204ENST00000472585 SLC38A7Q9NVC3 462 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 SLC8A2Q9UPR5 921 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 NUB1Q9Y5A7 615 aa10.17□□□□□ -0.78
VCL-204ENST00000472585 PHLPP2Q6ZVD8 1323 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 DPYSL4O14531 572 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 ATG13O75143 517 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 AKAP3O75969 853 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 RHOBTB1O94844 696 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 PRAMEF12O95522 483 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 HARSP12081 509 aaKnown RBP10.16□□□□□ -0.78
VCL-204ENST00000472585 CEACAM1P13688 526 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 CPB1P15086 417 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 CTHP32929 405 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 MCM4P33991 863 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 TNFSF9P41273 254 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 CREB5Q02930 508 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 GPR17Q13304 367 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 ELF2Q15723 593 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 NAIF1Q69YI7 327 aaPredicted RBP10.16□□□□□ -0.78
VCL-204ENST00000472585 TCEAL6Q6IPX3 200 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 DNAJB7Q7Z6W7 309 aaPredicted RBP10.16□□□□□ -0.78
VCL-204ENST00000472585 ERMNQ8TAM6 284 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 RIN3Q8TB24 985 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 TCEAL3Q969E4 200 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 ZC3H10Q96K80 434 aaKnown RBP10.16□□□□□ -0.78
VCL-204ENST00000472585 TCHPQ9BT92 498 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 SMG9Q9H0W8 520 aaKnown RBP10.16□□□□□ -0.78
VCL-204ENST00000472585 FBRSL1Q9HCM7 1045 aaKnown RBP10.16□□□□□ -0.78
VCL-204ENST00000472585 LRWD1Q9UFC0 647 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 MAFFQ9ULX9 164 aa10.16□□□□□ -0.78
VCL-204ENST00000472585 ADAMTS20P59510 1910 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 TTC26A0AVF1 554 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 MTMR11A4FU01 709 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 TAF4O00268 1085 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 FAM189A1O60320 539 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 CAVIN2O95810 425 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms