RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
BRCA1-211ENST00000472490 WSCD1Q658N2 575 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 TMC5Q6UXY8 1006 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 SPATA31D4Q6ZUB0 917 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 SV2AQ7L0J3 742 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 FRMD5Q7Z6J6 570 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 GPR149Q86SP6 731 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 SUSD6Q92537 303 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 TAF4BQ92750 862 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 MMS19Q96T76 1030 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 APOL5Q9BWW9 433 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 PIDD1Q9HB75 910 aa15.25■□□□□ 0.03
BRCA1-211ENST00000472490 WDR27A2RRH5 827 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 XYLBO75191 536 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 IL9P15248 144 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 PCSK1P29120 753 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 PIK3CAP42336 1068 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 MCCD1P59942 119 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-211ENST00000472490 TSPY1Q01534 308 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 GPR17Q13304 367 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 ZNF699Q32M78 642 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 CCDC40Q4G0X9 1142 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 DCAF17Q5H9S7 520 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-211ENST00000472490 ZNF667Q5HYK9 610 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 TCERG1LQ5VWI1 586 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 KRT39Q6A163 491 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 TCEAL8Q8IYN2 117 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 DCP1BQ8IZD4 617 aaKnown RBP15.24■□□□□ 0.03
BRCA1-211ENST00000472490 ADGRF2Q8IZF7 708 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 C12orf76Q8N812 135 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-211ENST00000472490 SLC7A14Q8TBB6 771 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 ADAMTS19Q8TE59 1207 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 C2orf15Q8WU43 125 aaKnown RBP15.24■□□□□ 0.03
BRCA1-211ENST00000472490 FAM84AQ96KN4 292 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 ACBD6Q9BR61 282 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 PRKD2Q9BZL6 878 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 CYP4F11Q9HBI6 524 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 TMEM8AQ9HCN3 771 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
BRCA1-211ENST00000472490 L1RE1Q9UN81 338 aa15.24■□□□□ 0.03
BRCA1-211ENST00000472490 PAPLNO95428 1278 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 LRG1P02750 347 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 POU2F2P09086 479 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 ERCC5P28715 1186 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-211ENST00000472490 GCLMP48507 274 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 STX17P56962 302 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 NLRP12P59046 1061 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 MYL6P60660 151 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 ADCY1Q08828 1119 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 TPD52L1Q16890 204 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-211ENST00000472490 SOWAHAQ2M3V2 549 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 CCDC183Q5T5S1 534 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 SASS6Q6UVJ0 657 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 ADHFE1Q8IWW8 467 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 UHRF1Q96T88 793 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-211ENST00000472490 PHF7Q9BWX1 381 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-211ENST00000472490 ZCWPW1Q9H0M4 648 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 XYLT2Q9H1B5 865 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 MMRN2Q9H8L6 949 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 HSFX1Q9UBD0 423 aa15.23■□□□□ 0.03
BRCA1-211ENST00000472490 NXF1Q9UBU9 619 aaKnown RBP15.23■□□□□ 0.03
BRCA1-211ENST00000472490 PDCD11Q14690 1871 aaKnown RBP15.23■□□□□ 0.03
BRCA1-211ENST00000472490 GABRDO14764 452 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 TACC1O75410 805 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 RFPL2O75678 378 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 TRIM49P0CI25 452 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 TRIM49CP0CI26 452 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 CCDC192P0DO97 292 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
BRCA1-211ENST00000472490 WARSP23381 471 aaKnown RBP15.22■□□□□ 0.03
BRCA1-211ENST00000472490 MXI1P50539 228 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 CETN1Q12798 172 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 PLD1Q13393 1074 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
BRCA1-211ENST00000472490 NFE2Q16621 373 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-211ENST00000472490 C1orf220Q5T0J3 134 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 RNF19BQ6ZMZ0 732 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 LIMS2Q7Z4I7 341 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 ELMOD1Q8N336 334 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 OR10T2Q8NGX3 314 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 SMG7Q92540 1137 aaKnown RBP15.22■□□□□ 0.03
BRCA1-211ENST00000472490 FAXDC2Q96IV6 333 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 DUSP9Q99956 384 aaKnown RBP15.22■□□□□ 0.03
BRCA1-211ENST00000472490 SRRTQ9BXP5 876 aaKnown RBP15.22■□□□□ 0.03
BRCA1-211ENST00000472490 SNX25Q9H3E2 840 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 NR2E1Q9Y466 385 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 XIRP2A4UGR9 3374 aa15.22■□□□□ 0.03
BRCA1-211ENST00000472490 ATG2AQ2TAZ0 1938 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 N4BP1O75113 896 aaKnown RBP15.21■□□□□ 0.03
BRCA1-211ENST00000472490 VNN1O95497 513 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 HLA-DRAP01903 254 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 ALDH1A3P47895 512 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 TUFMP49411 452 aaKnown RBP15.21■□□□□ 0.03
BRCA1-211ENST00000472490 DPCR1Q3MIW9 517 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 SLC39A12Q504Y0 691 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 RBM43Q6ZSC3 357 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms