RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 RIN3Q8TB24 985 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 TCEAL3Q969E4 200 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 CDK5RAP3Q96JB5 506 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 PYM1Q9BRP8 204 aaKnown RBP10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 MSTO1Q9BUK6 570 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 SLC46A2Q9BY10 475 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 FAM126AQ9BYI3 521 aaPredicted RBP10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 RAB34Q9BZG1 259 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 EBF3Q9H4W6 596 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 RPF1Q9H9Y2 349 aaKnown RBP10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 TRPV4Q9HBA0 871 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 ABI2Q9NYB9 513 aaPredicted RBP10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 UBQLN1Q9UMX0 589 aaKnown RBP10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 MAGED2Q9UNF1 606 aaPredicted RBP10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 CCL26Q9Y258 94 aa10.96□□□□□ -0.65
SCAMP3-205ENST00000472397 MYBPHLA2RUH7 354 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 OTOL1A6NHN0 477 aaPredicted RBP10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 OR6C75A6NL08 312 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 HCRTO43612 131 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 EGFP01133 1207 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 GUCY2CP25092 1073 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 LRPAP1P30533 357 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 TRAPPC10P48553 1259 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 SMTNP53814 917 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 SLC12A3P55017 1021 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 GRIN1Q05586 938 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 ORC2Q13416 577 aaPredicted RBP10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 MCM6Q14566 821 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 TAF12Q16514 161 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 CSRP2Q16527 193 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 CCDC142Q17RM4 750 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 ZC2HC1CQ53FD0 456 aaPredicted RBP10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 ARHGAP15Q53QZ3 475 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 C9orf57Q5W0N0 161 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 WSCD1Q658N2 575 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 FSTL4Q6MZW2 842 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 ARMCX5Q6P1M9 558 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 SLC39A4Q6P5W5 647 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 GPBP1Q86WP2 473 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 MAB21L3Q8N8X9 362 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 BEST2Q8NFU1 509 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 NETO1Q8TDF5 533 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 BPIFB1Q8TDL5 484 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 NOC3LQ8WTT2 800 aaKnown RBP10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 SPIRE2Q8WWL2 714 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 CHFRQ96EP1 664 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 HHIPQ96QV1 700 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 REEP2Q9BRK0 252 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 C8orf33Q9H7E9 229 aaPredicted RBP10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 TRPV5Q9NQA5 729 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 TMLHEQ9NVH6 421 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 EPG5Q9HCE0 2579 aa10.95□□□□□ -0.66
SCAMP3-205ENST00000472397 ANK1P16157 1881 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 CYB561D2O14569 222 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 HNRNPDLO14979 420 aaKnown RBP10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 FAM13AO94988 1023 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 KRT18P05783 430 aaKnown RBP10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 NEFLP07196 543 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 CCDC192P0DO97 292 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 ACAT1P24752 427 aaKnown RBP10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 NCKAP1LP55160 1127 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 LILRA4P59901 499 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 FCHO2Q0JRZ9 810 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 PSMD2Q13200 908 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 ARHGAP29Q52LW3 1261 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 SPATA1Q5VX52 437 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 TXNDC8Q6A555 127 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 IL31Q6EBC2 164 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 ZPBP2Q6X784 338 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 TTC30AQ86WT1 665 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 RALGPS2Q86X27 583 aaPredicted RBP10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 C12orf50Q8NA57 414 aaPredicted RBP10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 LEMD2Q8NC56 503 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 ZSWIM2Q8NEG5 633 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 PSMG2Q969U7 264 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 LLPHQ9BRT6 129 aaKnown RBP10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 PI4K2AQ9BTU6 479 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 TASP1Q9H6P5 420 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 HPS4Q9NQG7 708 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 TBX20Q9UMR3 447 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 ACACBO00763 2458 aa10.94□□□□□ -0.66
SCAMP3-205ENST00000472397 MAP1BP46821 2468 aaKnown RBP10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 RALGAPA1Q6GYQ0 2036 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 SCAMP3O14828 347 aaKnown RBP10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 GIPC1O14908 333 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 OGTO15294 1046 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 FAM189A1O60320 539 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 RNF40O75150 1001 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 RPP40O75818 363 aaKnown RBP10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 ODC1P11926 461 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 SPINK2P20155 84 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 AARSP49588 968 aaKnown RBP eCLIP10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 WNT7BP56706 349 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 HMGN5P82970 282 aaKnown RBP10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 CCINQ13939 588 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 TMEM132DQ14C87 1099 aa10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 KARSQ15046 597 aaKnown RBP10.93□□□□□ -0.66
SCAMP3-205ENST00000472397 DDR2Q16832 855 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms