RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ABCE1P61221 599 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CIPCQ9C0C6 399 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NUP160Q12769 1436 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MFAP3LO75121 409 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FAM107AO95990 144 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EIF2S1P05198 315 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PRIM2P49643 509 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SNAPC2Q13487 334 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ZC3H11AO75152 810 aaKnown RBP eCLIP13.82□□□□□ -0.23e-6■■■□□ 16
NPHP3-ACAD11-201ENST00000471702 CKMP06732 381 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SERPINB10P48595 397 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CLEC16AQ2KHT3 1053 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PLA2G4FQ68DD2 849 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DEFB128Q7Z7B8 93 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 BLOC1S5Q8TDH9 187 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 WNK4Q96J92 1243 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MXD3Q9BW11 206 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GRK2P25098 689 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NCOA4Q13772 614 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EFCAB12Q6NXP0 572 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CYFIP2Q96F07 1278 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FAM20AQ96MK3 541 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RAB23Q9ULC3 237 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 HEG1Q9ULI3 1381 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MIF4GDA9UHW6 222 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RNF103O00237 685 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PCDH8O95206 1070 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CHGBP05060 677 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 OSBPL1AQ9BXW6 950 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SESN1Q9Y6P5 492 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CFAP99D6REC4 459 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MYO1CO00159 1063 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 IGFBP4P22692 258 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CHI3L1P36222 383 aaPredicted RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PGM1P36871 562 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FLT3P36888 993 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 COG2Q14746 738 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 OTOAQ7RTW8 1153 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PODNQ7Z5L7 613 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CLYBLQ8N0X4 340 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 THAP11Q96EK4 314 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 IMPAD1Q9NX62 359 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LIMA1Q9UHB6 759 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCL15-CCL14A0A0B4J2E2 113 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GTF2E2P29084 291 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCDC15Q0P6D6 951 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 HIC1Q14526 733 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 INPP5AQ14642 412 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCL15Q16663 113 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 KRT74Q7RTS7 529 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 BNIPLQ7Z465 357 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MED15Q96RN5 788 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 WNT8AQ9H1J5 351 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 IGFLR1Q9H665 355 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FBXL21Q9UKT6 434 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCNB2O95067 398 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RBBP4Q09028 425 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ITGADQ13349 1161 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PFKFB3Q16875 520 aaPredicted RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 P3H1Q32P28 736 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MIB1Q86YT6 1006 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DHX40Q8IX18 779 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 VPS50Q96JG6 964 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 STRBPQ96SI9 672 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCDC3Q9BQI4 270 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MFSD1Q9H3U5 465 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TRPC4Q9UBN4 977 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 B3GAT3O94766 335 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PARNO95453 639 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FEN1P39748 380 aaKnown RBP13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PEX5P50542 639 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CAV1Q03135 178 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RUNX1T1Q06455 604 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GALNTL6Q49A17 601 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CLEC10AQ8IUN9 316 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EME1Q96AY2 570 aa13.81□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TCHHQ07283 1943 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SERPINB3P29508 390 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NOL9Q5SY16 702 aaKnown RBP13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 COPS7BQ9H9Q2 264 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FBXO10Q9UK96 956 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PTPN1P18031 435 aaKnown RBP13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GSTA3Q16772 222 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ADAM21Q9UKJ8 722 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 POU4F1Q01851 419 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CYP4A22Q5TCH4 519 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PIF1Q9H611 641 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 HEATR9A2RTY3 570 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EVPLLA8MZ36 301 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MYL2P10916 166 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 KRT20P35900 424 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RBP5P82980 135 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 STX12Q86Y82 276 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 UXS1Q8NBZ7 420 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms