RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 PCDHGA3Q9Y5H0 932 aa4.54□□□□□ -1.68
PRPF40A-207ENST00000471701 AOX1Q06278 1338 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 ADGRA2Q96PE1 1338 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 WDR91A4D1P6 747 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 F2RL2O00254 374 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 ARIH2O95376 493 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 CHEK2O96017 543 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 GJB1P08034 283 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 CELA2AP08217 269 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 FAM163BP0C2L3 166 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 NDUFB7P17568 137 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 NDUFV1P49821 464 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 CCT8P50990 548 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 PROK1P58294 105 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 BMPR2Q13873 1038 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 HABP2Q14520 560 aaPredicted RBP4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 PCBP2Q15366 365 aaKnown RBP eCLIP4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 EZH2Q15910 746 aaKnown RBP4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 RNF187Q5TA31 235 aaPredicted RBP4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 TMPRSS9Q7Z410 1059 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 CAMKK1Q8N5S9 505 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 C3orf20Q8ND61 904 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 FBXO41Q8TF61 875 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 SCARB1Q8WTV0 552 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 TEKT5Q96M29 485 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 PUS7Q96PZ0 661 aaKnown RBP4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 OSBPL9Q96SU4 736 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 SLAMF7Q9NQ25 335 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 RLIMQ9NVW2 624 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 TRHDEQ9UKU6 1024 aa4.53□□□□□ -1.68
PRPF40A-207ENST00000471701 WDR27A2RRH5 827 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF785A8K8V0 405 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 VWC2LB2RUY7 222 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 E9PLN8 166 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 ZFXP17010 805 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 ITGALP20701 1170 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 LPOP22079 712 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 ITPKBP27987 946 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 ALDH9A1P49189 494 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 KRT85P78386 507 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 LLGL1Q15334 1064 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 ABCB5Q2M3G0 1257 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 THEMIS2Q5TEJ8 643 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 MIER2Q8N344 545 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 SEMA6DQ8NFY4 1073 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 NSUN6Q8TEA1 469 aaKnown RBP4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 DPF1Q92782 380 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 FKBP10Q96AY3 582 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 VKORC1Q9BQB6 163 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 CNPPD1Q9BV87 410 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 ACTRT3Q9BYD9 372 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 RAD54BQ9Y620 910 aa4.52□□□□□ -1.69
PRPF40A-207ENST00000471701 VPS4BO75351 444 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 HNRNPCP07910 306 aaKnown RBP eCLIP4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF135P52742 658 aaPredicted RBP4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 ADKP55263 362 aaKnown RBP4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 SLC10A2Q12908 348 aaPredicted RBP4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 TBCCQ15814 346 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 TMEM119Q4V9L6 283 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 TAF2Q6P1X5 1199 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 SLC4A10Q6U841 1118 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF551Q7Z340 670 aaPredicted RBP4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 PSD4Q8NDX1 1056 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 RFKQ969G6 155 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 MTMR8Q96EF0 704 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF778Q96MU6 729 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 NELL2Q99435 816 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 C1QTNF7Q9BXJ2 289 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 CCDC8Q9H0W5 538 aaPredicted RBP4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 SERTAD4Q9NUC0 356 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 FLRT1Q9NZU1 646 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 ADAM21Q9UKJ8 722 aa4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 FNDC1Q4ZHG4 1894 aaPredicted RBP4.51□□□□□ -1.69
PRPF40A-207ENST00000471701 GABRDO14764 452 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 NXPH3O95157 252 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 GNAI2P04899 355 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 RHOP08100 348 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 FTH1P19P0C7X4 201 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 EBLN1P0CF75 366 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 CDK11BP21127 795 aaKnown RBP4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 CD6P30203 668 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 PHKA1P46020 1223 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 PIK3CGP48736 1102 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 DSC2Q02487 901 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 MTMR1Q13613 665 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 PTPN21Q16825 1174 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 RBM20Q5T481 1227 aaKnown RBP4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 CEP85Q6P2H3 762 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 USP37Q86T82 979 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 ATRIPQ8WXE1 791 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 DDX17Q92841 729 aaKnown RBP4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 FAM136AQ96C01 138 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 SMOC2Q9H3U7 446 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 GPR35Q9HC97 309 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 ARHGEF3Q9NR81 526 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 PCDHA3Q9Y5H8 950 aa4.5□□□□□ -1.69
PRPF40A-207ENST00000471701 WIPF3A6NGB9 483 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 TARM1B6A8C7 271 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 JTBO76095 146 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms