RNA–Protein interactions for RNA: ENST00000471470.1

CDC45-208, Transcript of cell division cycle 45, human

TSL 5

Gene CDC45, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC45-208	ENST00000471470	ARID3A	Q99856	593 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	DNAI2	Q9GZS0	605 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	SDCBP2	Q9H190	292 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	SNX25	Q9H3E2	840 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	CISH	Q9NSE2	258 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	CNTN6	Q9UQ52	1028 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	SSX2IP	Q9Y2D8	614 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470	GBF1	Q92538	1859 aa		13.55	□□□□□ -0.24
CDC45-208	ENST00000471470		H7C4K7	107 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	CILP	O75339	1184 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	TPM1	P09493	284 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	GNL1	P36915	607 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	RAP1GAP	P47736	663 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	GLUD2	P49448	558 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	CDH8	P55286	799 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	JAM2	P57087	298 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	DSG1	Q02413	1049 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	CREM	Q03060	361 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	YWHAH	Q04917	246 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	RAPGEF1	Q13905	1077 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	RTP2	Q5QGT7	225 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	VARS2	Q5ST30	1063 aa	Known RBP	13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	KIAA1841	Q6NSI8	718 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	TAS1R1	Q7RTX1	841 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	TMC6	Q7Z403	805 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	PPFIBP1	Q86W92	1011 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	VPS52	Q8N1B4	723 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	THEM5	Q8N1Q8	247 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	SPPL3	Q8TCT6	385 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	PIK3R5	Q8WYR1	880 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	ANP32B	Q92688	251 aa	Known RBP	13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	SPAG5	Q96R06	1193 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	MRPL45	Q9BRJ2	306 aa	Known RBP	13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	NUCKS1	Q9H1E3	243 aa	Known RBP	13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	CAPN11	Q9UMQ6	739 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	STXBP5L	Q9Y2K9	1186 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	BACE2	Q9Y5Z0	518 aa		13.54	□□□□□ -0.24
CDC45-208	ENST00000471470	OR6C75	A6NL08	312 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470		F8VZ95	297 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	GYPC	P04921	128 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	UROD	P06132	367 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	CTSA	P10619	480 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	CD58	P19256	250 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	PCSK1	P29120	753 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	STAT1	P42224	750 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	ZBED6	P86452	979 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	TBX2	Q13207	712 aa	Predicted RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	GPM6B	Q13491	265 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	BMS1	Q14692	1282 aa	Known RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	DRAP1	Q14919	205 aa	Predicted RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	ARHGAP44	Q17R89	818 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	KIAA0319	Q5VV43	1072 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	PDE12	Q6L8Q7	609 aa	Known RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	ZNF280D	Q6N043	979 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	SPRED2	Q7Z698	418 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	CEP57	Q86XR8	500 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	FAM71A	Q8IYT1	594 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	ZNF397	Q8NF99	534 aa	Predicted RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	OR6B3	Q8NGW1	331 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	BAP1	Q92560	729 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	ACBD6	Q9BR61	282 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	GPR88	Q9GZN0	384 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	LMAN2L	Q9H0V9	348 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	ZBP1	Q9H171	429 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	NLRC4	Q9NPP4	1024 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	DDX43	Q9NXZ2	648 aa	Known RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	IMPACT	Q9P2X3	320 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	MTUS1	Q9ULD2	1270 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	LUC7L2	Q9Y383	392 aa	Known RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	IRAK3	Q9Y616	596 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	NLRC5	Q86WI3	1866 aa		13.53	□□□□□ -0.24
CDC45-208	ENST00000471470	RANBP2	P49792	3224 aa	Known RBP	13.52	□□□□□ -0.24
CDC45-208	ENST00000471470		A8MXQ7	604 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	FOXN3	O00409	490 aa	Predicted RBP	13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	TBC1D4	O60343	1298 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	PAEP	P09466	180 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	ZNF132	P52740	706 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	NDST1	P52848	882 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	ARID5B	Q14865	1188 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	PSMD5	Q16401	504 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	CTXN3	Q4LDR2	81 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	TMEM270	Q6UE05	265 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	OSTM1	Q86WC4	334 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	CRYBG2	Q8N1P7	616 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	LNX1	Q8TBB1	728 aa	Predicted RBP	13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	WHAMM	Q8TF30	809 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	POF1B	Q8WVV4	589 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	ARNTL2	Q8WYA1	636 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	RIN2	Q8WYP3	895 aa	Predicted RBP	13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	SYN2	Q92777	582 aa	Predicted RBP	13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	TNIP3	Q96KP6	325 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	RTP3	Q9BQQ7	232 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	NT5C1A	Q9BXI3	368 aa		13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	ALG13	Q9NP73	1137 aa	Known RBP	13.52	□□□□□ -0.25
CDC45-208	ENST00000471470	NGRN	Q9NPE2	291 aa	Known RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms