RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 BPIFB4P59827 614 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 ADAM8P78325 824 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 C4orf46Q504U0 113 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 PRAMEF14Q5SWL7 426 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 FAM83BQ5T0W9 1011 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 TOM1L2Q6ZVM7 507 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 LRRC56Q8IYG6 542 aaPredicted RBP6.84□□□□□ -1.31
CKS1B-204ENST00000471245 ZDHHC14Q8IZN3 488 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 CARFQ8N187 725 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 LINC01356Q8N9X3 169 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 TXNDC5Q8NBS9 432 aaKnown RBP6.84□□□□□ -1.31
CKS1B-204ENST00000471245 BRIX1Q8TDN6 353 aaKnown RBP6.84□□□□□ -1.31
CKS1B-204ENST00000471245 ZNF526Q8TF50 670 aaPredicted RBP6.84□□□□□ -1.31
CKS1B-204ENST00000471245 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 LDAHQ9H6V9 325 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 SARS2Q9NP81 518 aaKnown RBP6.84□□□□□ -1.31
CKS1B-204ENST00000471245 CNNM1Q9NRU3 951 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 SIDT1Q9NXL6 827 aaKnown RBP6.84□□□□□ -1.31
CKS1B-204ENST00000471245 STAP2Q9UGK3 403 aa6.84□□□□□ -1.31
CKS1B-204ENST00000471245 ATP10DQ9P241 1426 aa6.84□□□□□ -1.32
CKS1B-204ENST00000471245 QRICH2Q9H0J4 1663 aa6.84□□□□□ -1.32
CKS1B-204ENST00000471245 ABCC6O95255 1503 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 PMS2P1A4D2B8 440 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 FOSP01100 380 aaPredicted RBP6.83□□□□□ -1.32
CKS1B-204ENST00000471245 ALOX15P16050 662 aaPredicted RBP6.83□□□□□ -1.32
CKS1B-204ENST00000471245 PRDX5P30044 214 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 PTPN7P35236 360 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 PRIM2P49643 509 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 ZRSR2Q15696 482 aaKnown RBP6.83□□□□□ -1.32
CKS1B-204ENST00000471245 ATP2B3Q16720 1220 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 FLYWCH1Q4VC44 716 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 EMC10Q5UCC4 262 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 KRT40Q6A162 431 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 GPR155Q7Z3F1 870 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 RALYLQ86SE5 291 aaKnown RBP6.83□□□□□ -1.32
CKS1B-204ENST00000471245 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 PLXDC1Q8IUK5 500 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 ADAMTS17Q8TE56 1095 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 MBD6Q96DN6 1003 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 CDC5LQ99459 802 aaKnown RBP6.83□□□□□ -1.32
CKS1B-204ENST00000471245 CDK19Q9BWU1 502 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 KIAA1586Q9HCI6 787 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 PTPRHQ9HD43 1115 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 PADI4Q9UM07 663 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 LY75O60449 1722 aa6.83□□□□□ -1.32
CKS1B-204ENST00000471245 ATRNL1Q5VV63 1379 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 WDR17Q8IZU2 1322 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 ARHGAP6O43182 974 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 TCEA3O75764 348 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 NPR1P16066 1061 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 FLT3LGP49771 235 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 ATP2C1P98194 919 aaPredicted RBP6.82□□□□□ -1.32
CKS1B-204ENST00000471245 STK3Q13188 491 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 ZNF568Q3ZCX4 644 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 DGKKQ5KSL6 1271 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 ERAP2Q6P179 960 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 C1orf228Q6PIY5 440 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 SH2D3CQ8N5H7 860 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 ANKRD53Q8N9V6 530 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 REPS2Q8NFH8 660 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 SUCLG2Q96I99 432 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 MSLNLQ96KJ4 702 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 MRGPRX1Q96LB2 322 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 RIPOR3Q96MK2 946 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 UNKQ9C0B0 810 aaKnown RBP6.82□□□□□ -1.32
CKS1B-204ENST00000471245 ENKD1Q9H0I2 346 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 MRPL46Q9H2W6 279 aaKnown RBP6.82□□□□□ -1.32
CKS1B-204ENST00000471245 MSL2Q9HCI7 577 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 STARD7Q9NQZ5 370 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 GNL3LQ9NVN8 582 aaKnown RBP6.82□□□□□ -1.32
CKS1B-204ENST00000471245 PIH1D1Q9NWS0 290 aaKnown RBP6.82□□□□□ -1.32
CKS1B-204ENST00000471245 FNIP2Q9P278 1114 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 TNS2Q63HR2 1409 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 LTN1O94822 1766 aa6.82□□□□□ -1.32
CKS1B-204ENST00000471245 KLRG2A4D1S0 409 aaPredicted RBP6.81□□□□□ -1.32
CKS1B-204ENST00000471245 F2RL2O00254 374 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 FFAR3O14843 346 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 CD1AP06126 327 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 EN2P19622 333 aaPredicted RBP6.81□□□□□ -1.32
CKS1B-204ENST00000471245 FPR1P21462 350 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 SLC7A1P30825 629 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 CNGA2Q16280 664 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 TBR1Q16650 682 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 FAM47AQ5JRC9 791 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 DACT2Q5SW24 774 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 OTUD7BQ6GQQ9 843 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 CMTM4Q8IZR5 234 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 DCBLD1Q8N8Z6 715 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 OR14K1Q8NGZ2 314 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 MDM1Q8TC05 714 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 KBTBD7Q8WVZ9 684 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 RABGGTAQ92696 567 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 LCORQ96JN0 433 aaPredicted RBP6.81□□□□□ -1.32
CKS1B-204ENST00000471245 C11orf54Q9H0W9 315 aaPredicted RBP6.81□□□□□ -1.32
CKS1B-204ENST00000471245 TRMT13Q9NUP7 481 aaKnown RBP6.81□□□□□ -1.32
CKS1B-204ENST00000471245 OGDHLQ9ULD0 1010 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 CORO2BQ9UQ03 480 aa6.81□□□□□ -1.32
CKS1B-204ENST00000471245 ACTL7AQ9Y615 435 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms