RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 MANFP55145 182 aaKnown RBP3.7□□□□□ -1.82
CLIP4-209ENST00000471165 ZXDBP98169 803 aa3.7□□□□□ -1.82
CLIP4-209ENST00000471165 PELI3Q8N2H9 469 aa3.7□□□□□ -1.82
CLIP4-209ENST00000471165 SPEM1Q8N4L4 309 aa3.7□□□□□ -1.82
CLIP4-209ENST00000471165 UHRF1Q96T88 793 aaPredicted RBP3.7□□□□□ -1.82
CLIP4-209ENST00000471165 TLR10Q9BXR5 811 aa3.7□□□□□ -1.82
CLIP4-209ENST00000471165 FGD5Q6ZNL6 1462 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 CCDC85CA6NKD9 419 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 SUN1O94901 812 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 ASLP04424 464 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 FPR1P21462 350 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 HOXA4Q00056 320 aaPredicted RBP3.69□□□□□ -1.82
CLIP4-209ENST00000471165 MC2RQ01718 297 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 ZNF460Q14592 562 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 ASIC2Q16515 512 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 NR2C2APQ86WQ0 139 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 PASD1Q8IV76 773 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 EFHBQ8N7U6 833 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 RIN2Q8WYP3 895 aaPredicted RBP3.69□□□□□ -1.82
CLIP4-209ENST00000471165 FAM118BQ9BPY3 351 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 ARHGEF3Q9NR81 526 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 MCM8Q9UJA3 840 aa3.69□□□□□ -1.82
CLIP4-209ENST00000471165 SCAF8Q9UPN6 1271 aaKnown RBP3.69□□□□□ -1.82
CLIP4-209ENST00000471165 B4DGG1 531 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 TGM5O43548 720 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 PDIA4P13667 645 aaKnown RBP3.68□□□□□ -1.82
CLIP4-209ENST00000471165 ECHS1P30084 290 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 BMPR2Q13873 1038 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 AARS2Q5JTZ9 985 aaKnown RBP3.68□□□□□ -1.82
CLIP4-209ENST00000471165 ZNF804AQ7Z570 1209 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 PIP4P1Q86T03 277 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 PQLC1Q8N2U9 271 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 DDX17Q92841 729 aaKnown RBP3.68□□□□□ -1.82
CLIP4-209ENST00000471165 FKBP10Q96AY3 582 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 FAM234AQ9H0X4 552 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 MS4A5Q9H3V2 200 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 LDAHQ9H6V9 325 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 CDYLQ9Y232 598 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 MMP24Q9Y5R2 645 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 ADCY10Q96PN6 1610 aa3.68□□□□□ -1.82
CLIP4-209ENST00000471165 CCDC88BA6NC98 1476 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 PLB1Q6P1J6 1458 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 TEX14Q8IWB6 1497 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 TCRBV7S2A1N4TA0A589 114 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 ZBTB7CA1YPR0 619 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 LINC01565O15544 149 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 OPA1O60313 960 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 EYA4O95677 639 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 HOXD9P28356 352 aaPredicted RBP3.67□□□□□ -1.82
CLIP4-209ENST00000471165 LGALS4P56470 323 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 HLXQ14774 488 aaPredicted RBP3.67□□□□□ -1.82
CLIP4-209ENST00000471165 PIM3Q86V86 326 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 GPR156Q8NFN8 814 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 RITA1Q96K30 269 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 SLITRK1Q96PX8 696 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 KCTD10Q9H3F6 313 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 ACTL7AQ9Y615 435 aa3.67□□□□□ -1.82
CLIP4-209ENST00000471165 SHROOM2Q13796 1616 aa3.66□□□□□ -1.82
CLIP4-209ENST00000471165 PPRC1Q5VV67 1664 aaKnown RBP3.66□□□□□ -1.82
CLIP4-209ENST00000471165 CCDC163A0A0D9SF12 145 aa3.66□□□□□ -1.82
CLIP4-209ENST00000471165 PLA2G2AP14555 144 aa3.66□□□□□ -1.82
CLIP4-209ENST00000471165 PER3P56645 1201 aa3.66□□□□□ -1.82
CLIP4-209ENST00000471165 OTUD3Q5T2D3 398 aaPredicted RBP3.66□□□□□ -1.82
CLIP4-209ENST00000471165 LANCL2Q9NS86 450 aa3.66□□□□□ -1.82
CLIP4-209ENST00000471165 AJAP1Q9UKB5 411 aaPredicted RBP3.66□□□□□ -1.82
CLIP4-209ENST00000471165 PTPRGP23470 1445 aa3.66□□□□□ -1.82
CLIP4-209ENST00000471165 YEATS2Q9ULM3 1422 aa3.66□□□□□ -1.82
CLIP4-209ENST00000471165 MED1Q15648 1581 aaPredicted RBP3.66□□□□□ -1.82
CLIP4-209ENST00000471165 FNDC1Q4ZHG4 1894 aaPredicted RBP3.66□□□□□ -1.82
CLIP4-209ENST00000471165 TOP2AP11388 1531 aaKnown RBP3.65□□□□□ -1.82
CLIP4-209ENST00000471165 GLI2P10070 1586 aa3.65□□□□□ -1.82
CLIP4-209ENST00000471165 H0YIZ8 118 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 TOR1BO14657 336 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 TEX33O43247 280 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 CAMTA2O94983 1202 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 RAPGEF3O95398 923 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 SRSF1Q07955 248 aaKnown RBP eCLIP3.65□□□□□ -1.83
CLIP4-209ENST00000471165 ZNF844Q08AG5 666 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 DAB2IPQ5VWQ8 1189 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 CDCA2Q69YH5 1023 aaPredicted RBP3.65□□□□□ -1.83
CLIP4-209ENST00000471165 ANKRD16Q6P6B7 361 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 TMPRSS9Q7Z410 1059 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 ZNF610Q8N9Z0 462 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 CUL5Q93034 780 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 MLXIPQ9HAP2 919 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 WDR97A6NE52 1622 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 KIF21BO75037 1637 aa3.65□□□□□ -1.83
CLIP4-209ENST00000471165 EPRSP07814 1512 aaKnown RBP3.65□□□□□ -1.83
CLIP4-209ENST00000471165 FHAD1B1AJZ9 1412 aa3.64□□□□□ -1.83
CLIP4-209ENST00000471165 SRCAPQ6ZRS2 3230 aa3.64□□□□□ -1.83
CLIP4-209ENST00000471165 ERI2A8K979 691 aaKnown RBP3.64□□□□□ -1.83
CLIP4-209ENST00000471165 DNAJC8O75937 253 aaPredicted RBP3.64□□□□□ -1.83
CLIP4-209ENST00000471165 LPLP06858 475 aa3.64□□□□□ -1.83
CLIP4-209ENST00000471165 PCSK1P29120 753 aa3.64□□□□□ -1.83
CLIP4-209ENST00000471165 PHC1P78364 1004 aa3.64□□□□□ -1.83
CLIP4-209ENST00000471165 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
CLIP4-209ENST00000471165 CAPRIN2Q6IMN6 1127 aaKnown RBP3.64□□□□□ -1.83
CLIP4-209ENST00000471165 UBE2R2Q712K3 238 aaPredicted RBP3.64□□□□□ -1.83
CLIP4-209ENST00000471165 ZNF548Q8NEK5 533 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms