RNA–Protein interactions for RNA: ENST00000471122.5

GRIN1-211, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIN1, Length 4,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-211ENST00000471122 CTCFP49711 727 aaPredicted RBP13.15□□□□□ -0.3
GRIN1-211ENST00000471122 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
GRIN1-211ENST00000471122 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 RIPK2O43353 540 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 SLC4A1P02730 911 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 POLE2P56282 527 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 COPS2P61201 443 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 TAF1BQ53T94 588 aaPredicted RBP13.15□□□□□ -0.3
GRIN1-211ENST00000471122 FAM83AQ86UY5 434 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 GCOM2Q9BZD3 368 aaPredicted RBP13.15□□□□□ -0.3
GRIN1-211ENST00000471122 PCDHA3Q9Y5H8 950 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
GRIN1-211ENST00000471122 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 ANKRD63C9JTQ0 380 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 ITGB3P05106 788 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 MYL6P60660 151 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 CCNG2Q16589 344 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 FAXCQ5TGI0 409 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 AGR3Q8TD06 166 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
GRIN1-211ENST00000471122 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 HYIQ5T013 277 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 RYBPQ8N488 228 aaPredicted RBP13.14□□□□□ -0.31
GRIN1-211ENST00000471122 GSDMBQ8TAX9 411 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 DTX3LQ8TDB6 740 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
GRIN1-211ENST00000471122 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.14□□□□□ -0.31
GRIN1-211ENST00000471122 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 ASB14A6NK59 587 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 ASAP2O43150 1006 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 NOL4O94818 638 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 ZFXP17010 805 aaPredicted RBP13.14□□□□□ -0.31
GRIN1-211ENST00000471122 STX1BP61266 288 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 TMEM62Q0P6H9 643 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 MDH1BQ5I0G3 518 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 EMC1Q8N766 993 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 CCNYL1Q8N7R7 359 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 CHST13Q8NET6 341 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 EXD1Q8NHP7 514 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 ZNF606Q8WXB4 792 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 WWP1Q9H0M0 922 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 CISHQ9NSE2 258 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 ATP9BO43861 1147 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 CALCAP01258 141 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 PGM1P36871 562 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 MARCKSL1P49006 195 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 OVGP1Q12889 678 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 MAP7Q14244 749 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 FOXR2Q6PJQ5 311 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 IQCKQ8N0W5 287 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 ABRAQ8N0Z2 381 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 PPCSQ9HAB8 311 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 NOD2Q9HC29 1040 aa13.14□□□□□ -0.31
GRIN1-211ENST00000471122 SPATS2LQ9NUQ6 558 aaKnown RBP13.14□□□□□ -0.31
GRIN1-211ENST00000471122 PRMT7Q9NVM4 692 aaPredicted RBP13.14□□□□□ -0.31
GRIN1-211ENST00000471122 WNT10BO00744 389 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 OTUD4Q01804 1114 aaKnown RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 AGGF1Q8N302 714 aaeCLIP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 ACTL9Q8TC94 416 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 GLIS2Q9BZE0 524 aaPredicted RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 RANBP17Q9H2T7 1088 aaKnown RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 CHST7Q9NS84 486 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 PAK5Q9P286 719 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 NAALADL1Q9UQQ1 740 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 CCDC22O60826 627 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 UBOX5O94941 541 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 ENO1P06733 434 aaKnown RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 ITGB5P18084 799 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 CLCN3P51790 818 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 KPNA2P52292 529 aaKnown RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 GEMIN4P57678 1058 aaKnown RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 GCNT1Q02742 428 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 PPATQ06203 517 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 PACS2Q86VP3 889 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 SCFD2Q8WU76 684 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 VPS39Q96JC1 886 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 TRIM4Q9C037 500 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 PHTF1Q9UMS5 762 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 MYH2Q9UKX2 1941 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 MARSP56192 900 aaKnown RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 ARPP19P56211 112 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
GRIN1-211ENST00000471122 ZBTB45Q96K62 511 aaPredicted RBP13.13□□□□□ -0.31
GRIN1-211ENST00000471122 CGRRF1Q99675 332 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms