RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 COL4A3Q01955 1670 aa6.92□□□□□ -1.3
SSB-209ENST00000470621 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 FAM227AF5H4B4 570 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 TOR1BO14657 336 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 GNAI2P04899 355 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 KITP10721 976 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 PIGFQ07326 219 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 FSTL1Q12841 308 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 GFOD2Q3B7J2 385 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 ARMC6Q6NXE6 501 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 TAF2Q6P1X5 1199 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 CLNKQ7Z7G1 428 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 KIAA0319LQ8IZA0 1049 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 FAM46DQ8NEK8 389 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 SSH3Q8TE77 659 aa6.91□□□□□ -1.3
SSB-209ENST00000470621 UNC5CO95185 931 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 CHEK2O96017 543 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 GATA3P23771 443 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 KCNJ5P48544 419 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 USP14P54578 494 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 TCF15Q12870 199 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 CNN3Q15417 329 aaKnown RBP6.9□□□□□ -1.3
SSB-209ENST00000470621 MAEAQ7L5Y9 396 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 ADGRG5Q8IZF4 528 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 AMER2Q8N7J2 671 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 FAM156AQ8NDB6 213 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 PSD4Q8NDX1 1056 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 POC1BQ8TC44 478 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 TIFAQ96CG3 184 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 Q96MF0 132 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 TTPALQ9BTX7 342 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 CNPPD1Q9BV87 410 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 C22orf23Q9BZE7 217 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 SLITRK6Q9H5Y7 841 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 SYBUQ9NX95 663 aa6.9□□□□□ -1.3
SSB-209ENST00000470621 TESQ9UGI8 421 aaKnown RBP6.9□□□□□ -1.3
SSB-209ENST00000470621 TRGV11A0A075B6L2 103 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 GOLGA6CA6NDK9 693 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 GOLGA6BA6NDN3 693 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 MYADML2A6NDP7 307 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 GOLGA6DP0CG33 693 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 PIM1P11309 404 aaPredicted RBP6.89□□□□□ -1.31
SSB-209ENST00000470621 FDXRP22570 491 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 ANXA11P50995 505 aaKnown RBP6.89□□□□□ -1.31
SSB-209ENST00000470621 DYRK1AQ13627 763 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 GBX1Q14549 363 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 PREPLQ4J6C6 727 aaPredicted RBP6.89□□□□□ -1.31
SSB-209ENST00000470621 ABHD17BQ5VST6 288 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 PCSK4Q6UW60 755 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 LCORLQ8N3X6 602 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 SLC44A3Q8N4M1 653 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 PTCD3Q96EY7 689 aaKnown RBP6.89□□□□□ -1.31
SSB-209ENST00000470621 GOLGA6AQ9NYA3 693 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 MED16Q9Y2X0 877 aa6.89□□□□□ -1.31
SSB-209ENST00000470621 FRMPD2Q68DX3 1309 aaPredicted RBP6.88□□□□□ -1.31
SSB-209ENST00000470621 A0A1W2PPL8 197 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 CAPN8A6NHC0 703 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 TPP1O14773 563 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 RPS7P62081 194 aaKnown RBP6.88□□□□□ -1.31
SSB-209ENST00000470621 FPGSQ05932 587 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 SF3B3Q15393 1217 aaKnown RBP6.88□□□□□ -1.31
SSB-209ENST00000470621 LAIR1Q6GTX8 287 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 APOA5Q6Q788 366 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 COLGALT2Q8IYK4 626 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 IL31RAQ8NI17 732 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 SLC30A5Q8TAD4 765 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 TBCCD1Q9NVR7 557 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
SSB-209ENST00000470621 L1RE1Q9UN81 338 aa6.88□□□□□ -1.31
SSB-209ENST00000470621 USP19O94966 1318 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 DCLK1O15075 740 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 FOXN1O15353 648 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 KRTAP1-1Q07627 177 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 FOXI1Q12951 378 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 HECTD2Q5U5R9 776 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 SP5Q6BEB4 398 aaPredicted RBP6.87□□□□□ -1.31
SSB-209ENST00000470621 CYB5RLQ6IPT4 315 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 SNX19Q92543 992 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 TRIM54Q9BYV2 358 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 TTYH3Q9C0H2 523 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 BHMT2Q9H2M3 363 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 IKZF4Q9H2S9 585 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 CYP4F11Q9HBI6 524 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 CASS4Q9NQ75 786 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 CNNM1Q9NRU3 951 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 PIH1D1Q9NWS0 290 aaKnown RBP6.87□□□□□ -1.31
SSB-209ENST00000470621 HESX1Q9UBX0 185 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 NEU2Q9Y3R4 380 aa6.87□□□□□ -1.31
SSB-209ENST00000470621 EPN1Q9Y6I3 576 aaPredicted RBP6.87□□□□□ -1.31
SSB-209ENST00000470621 POLR2AP24928 1970 aaKnown RBP6.87□□□□□ -1.31
SSB-209ENST00000470621 SALL3Q9BXA9 1300 aa6.86□□□□□ -1.31
SSB-209ENST00000470621 CFAP69A5D8W1 941 aa6.86□□□□□ -1.31
SSB-209ENST00000470621 PHGDHO43175 533 aaKnown RBP6.86□□□□□ -1.31
SSB-209ENST00000470621 GRPP07492 148 aa6.86□□□□□ -1.31
SSB-209ENST00000470621 PPP3CBP16298 524 aa6.86□□□□□ -1.31
SSB-209ENST00000470621 PROZP22891 400 aa6.86□□□□□ -1.31
SSB-209ENST00000470621 NPTX2P47972 431 aa6.86□□□□□ -1.31
SSB-209ENST00000470621 HNRNPMP52272 730 aaKnown RBP eCLIP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms