RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 KIF12Q96FN5 646 aa13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 LRRC3BQ96PB8 259 aa13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 SMG9Q9H0W8 520 aaKnown RBP13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 CRISPLD1Q9H336 500 aa13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 TASP1Q9H6P5 420 aa13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 TMEM134Q9H6X4 195 aa13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 TMEM9BQ9NQ34 198 aa13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
HIGD1A-205ENST00000470543 IGF2RP11717 2491 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 KHNYNO15037 678 aaKnown RBP13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 EPB41L2O43491 1005 aaKnown RBP13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 HIP1RO75146 1068 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 CTDNEP1O95476 244 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 APBB3O95704 486 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 CXCL8P10145 99 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 ODC1P11926 461 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 PPP2R3AQ06190 1150 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 SPAG1Q07617 926 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 PSMD2Q13200 908 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 RUNX3Q13761 415 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 MYBPC2Q14324 1141 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 ANKRD1Q15327 319 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 SEZ6Q53EL9 994 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 TMEM196Q5HYL7 178 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 CENPPQ6IPU0 288 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 TTC9BQ8N6N2 239 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 ATAD1Q8NBU5 361 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 LPIN3Q9BQK8 851 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 DUSP15Q9H1R2 295 aaPredicted RBP13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 EBF3Q9H4W6 596 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 PTPRHQ9HD43 1115 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 GKN1Q9NS71 199 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 DDX19AQ9NUU7 478 aaKnown RBP13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 ARHGAP28Q9P2N2 729 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 RBM19Q9Y4C8 960 aaKnown RBP13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 TSC2P49815 1807 aa13.59□□□□□ -0.23
HIGD1A-205ENST00000470543 LNP1A1A4G5 178 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 SLC16A4O15374 487 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 TOM1L1O75674 476 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 VNN2O95498 520 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 EGFP01133 1207 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 DRD1P21728 446 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 DGKEP52429 567 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 UAP1L1Q3KQV9 507 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 TRIM68Q6AZZ1 485 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 TTC16Q8NEE8 873 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 RPLP0P6Q8NHW5 317 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 SNX29Q8TEQ0 813 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 BICD1Q96G01 975 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 SCNM1Q9BWG6 230 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 ZMYM5Q9UJ78 669 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 ANK1P16157 1881 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 TCHHQ07283 1943 aa13.58□□□□□ -0.24
HIGD1A-205ENST00000470543 MYO16Q9Y6X6 1858 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 DENND4CQ5VZ89 1909 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 BCLAF3A2AJT9 711 aaKnown RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 TRDMT1O14717 391 aaKnown RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 DCLK1O15075 740 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 CLDN3O15551 220 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 CEACAM1P13688 526 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 FDPSP14324 419 aaKnown RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 TYMPP19971 482 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 PROZP22891 400 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 WEE1P30291 646 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 LRPAP1P30533 357 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 TUFMP49411 452 aaKnown RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 ORC2Q13416 577 aaPredicted RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 GNL2Q13823 731 aaKnown RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 ZNF174Q15697 407 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 SLC10A6Q3KNW5 377 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 FBXO43Q4G163 708 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 SLC39A12Q504Y0 691 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 KIAA1211LQ6NV74 962 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 TAS1R3Q7RTX0 852 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 C11orf74Q86VG3 221 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 CMTM8Q8IZV2 173 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 NECAB1Q8N987 351 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 TSTD1Q8NFU3 115 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 ZBTB45Q96K62 511 aaPredicted RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 P2RY13Q9BPV8 354 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 POLR3BQ9NW08 1133 aaPredicted RBP13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 LRWD1Q9UFC0 647 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 KIAA1549LQ6ZVL6 1849 aa13.57□□□□□ -0.24
HIGD1A-205ENST00000470543 ZFYVE26Q68DK2 2539 aa13.56□□□□□ -0.24
HIGD1A-205ENST00000470543 SRRM3A6NNA2 597 aaPredicted RBP13.56□□□□□ -0.24
HIGD1A-205ENST00000470543 LARGE1O95461 756 aa13.56□□□□□ -0.24
HIGD1A-205ENST00000470543 SMTNP53814 917 aa13.56□□□□□ -0.24
HIGD1A-205ENST00000470543 DMC1Q14565 340 aa13.56□□□□□ -0.24
HIGD1A-205ENST00000470543 USP39Q53GS9 565 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms