RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 MAPK8IP1Q9UQF2 711 aa15.22■□□□□ 0.03
TOP3B-215ENST00000470338 ZFP37Q9Y6Q3 630 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-215ENST00000470338 MTMR11A4FU01 709 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 HUS1O60921 280 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 GADD45BO75293 160 aaPredicted RBP15.21■□□□□ 0.03
TOP3B-215ENST00000470338 CST3P01034 146 aaPredicted RBP15.21■□□□□ 0.03
TOP3B-215ENST00000470338 LAMP2P13473 410 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 CASP4P49662 377 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 MYO1EQ12965 1108 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 DUSP4Q13115 394 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 PABPC1LQ4VXU2 614 aaKnown RBP15.21■□□□□ 0.03
TOP3B-215ENST00000470338 COBLL1Q53SF7 1204 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 DPH6Q7L8W6 267 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 PDCL2Q8N4E4 241 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 TOP6BLQ8N6T0 577 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 HPDLQ96IR7 371 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 PGLYRP2Q96PD5 576 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 CRISPLD1Q9H336 500 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 HOOK1Q9UJC3 728 aaKnown RBP15.21■□□□□ 0.03
TOP3B-215ENST00000470338 R3HCC1Q9Y3T6 440 aaKnown RBP15.21■□□□□ 0.03
TOP3B-215ENST00000470338 PCDHA5Q9Y5H7 936 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 SNX9Q9Y5X1 595 aa15.21■□□□□ 0.03
TOP3B-215ENST00000470338 FAM86C2PA6NEL3 165 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 PRR33A8MZF0 331 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 GABRDO14764 452 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 MAPK13O15264 365 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 SMC2O95347 1197 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 ASGR2P07307 311 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 RHOP08100 348 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 AP3M2P53677 418 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 TWF1Q12792 350 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 SMARCB1Q12824 385 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 SOWAHAQ2M3V2 549 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 SLC39A12Q504Y0 691 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 ZCWPW2Q504Y3 356 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 ZNF658Q5TYW1 1059 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-215ENST00000470338 TRIM67Q6ZTA4 783 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 GET4Q7L5D6 327 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-215ENST00000470338 LRRTM3Q86VH5 581 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 UBALD2Q8IYN6 164 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 ATAD1Q8NBU5 361 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 TMC2Q8TDI7 906 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 NXPE3Q969Y0 559 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 ACBD6Q9BR61 282 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 KCNK12Q9HB15 430 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 CEP72Q9P209 647 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 IGSF9Q9P2J2 1179 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 CDH7Q9ULB5 785 aa15.2■□□□□ 0.02
TOP3B-215ENST00000470338 LRRIQ3A6PVS8 624 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 C4BPAP04003 597 aaKnown RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 NR2F2P24468 414 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 PRCPP42785 496 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 LHX1P48742 406 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 MCCD1P59942 119 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 SIGLEC14Q08ET2 396 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 MTMR3Q13615 1198 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 SMYD4Q8IYR2 804 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 DCP1BQ8IZD4 617 aaKnown RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 ITFG1Q8TB96 612 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 C2orf15Q8WU43 125 aaKnown RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 ERCC4Q92889 916 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 FGF13Q92913 245 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 SMARCE1Q969G3 411 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 ZNF512Q96ME7 567 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 GTPBP4Q9BZE4 634 aaKnown RBP15.19■□□□□ 0.02
TOP3B-215ENST00000470338 FRMD4BQ9Y2L6 1034 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 SLC27A5Q9Y2P5 690 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 YIPF1Q9Y548 306 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 DENND4CQ5VZ89 1909 aa15.19■□□□□ 0.02
TOP3B-215ENST00000470338 PTPRDP23468 1912 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 ANHXE9PGG2 379 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 IKBKBO14920 756 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 KINO60870 393 aaKnown RBP15.18■□□□□ 0.02
TOP3B-215ENST00000470338 AKAP3O75969 853 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 MICAL2O94851 1124 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 FAM163BP0C2L3 166 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 RPL13P26373 211 aaKnown RBP15.18■□□□□ 0.02
TOP3B-215ENST00000470338 ATICP31939 592 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 EPHA5P54756 1037 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 DLG4P78352 724 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 ENPEPQ07075 957 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 PLD1Q13393 1074 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 ADAM9Q13443 819 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 TDGQ13569 410 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 SLC5A9Q2M3M2 681 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 EDRF1Q3B7T1 1238 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 PRSS36Q5K4E3 855 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 BMP8AQ7Z5Y6 402 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 OSTM1Q86WC4 334 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 ADGRF2Q8IZF7 708 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 ELMOD1Q8N336 334 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 SPPL2BQ8TCT7 592 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 KBTBD7Q8WVZ9 684 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 ASIC4Q96FT7 647 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 PKMYT1Q99640 499 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 CORO1BQ9BR76 489 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 XYLT2Q9H1B5 865 aa15.18■□□□□ 0.02
TOP3B-215ENST00000470338 DNAJC25Q9H1X3 360 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms