RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 POLR3CQ9BUI4 534 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 MRPL4Q9BYD3 311 aaKnown RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 DUSP15Q9H1R2 295 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 THG1LQ9NWX6 298 aaKnown RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 CNTN3Q9P232 1028 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 ANKFY1Q9P2R3 1169 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 PHLPP2Q6ZVD8 1323 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 CNOT1A5YKK6 2376 aaKnown RBP9.94□□□□□ -0.82
CCDC171-204ENST00000470191 SFI1A8K8P3 1242 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 CAVIN2O95810 425 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 FDPSP14324 419 aaKnown RBP9.94□□□□□ -0.82
CCDC171-204ENST00000470191 RPA1P27694 616 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 HOXA6P31267 233 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 NPTX2P47972 431 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 GRSF1Q12849 480 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC171-204ENST00000470191 PSMD2Q13200 908 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 TRIM29Q14134 588 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 ZNF174Q15697 407 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 TAF12Q16514 161 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 NAIF1Q69YI7 327 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-204ENST00000470191 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 TAS1R3Q7RTX0 852 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 SYNPOQ8N3V7 929 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 GIPC2Q8TF65 315 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 SEPT5Q99719 369 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-204ENST00000470191 SCNM1Q9BWG6 230 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 EBF3Q9H4W6 596 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 FBRSL1Q9HCM7 1045 aaKnown RBP9.94□□□□□ -0.82
CCDC171-204ENST00000470191 KMT5AQ9NQR1 393 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 KIAA1024Q9UPX6 916 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 PCDHGA5Q9Y5G8 931 aa9.94□□□□□ -0.82
CCDC171-204ENST00000470191 MTMR11A4FU01 709 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 SRRM3A6NNA2 597 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-204ENST00000470191 PATE3B3GLJ2 98 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 SLC16A4O15374 487 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 ATG13O75143 517 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 HIP1RO75146 1068 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 CXCL8P10145 99 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 MCF2P10911 925 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 ARSAP15289 507 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 MCM2P49736 904 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 DGKEP52429 567 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 PLCB2Q00722 1185 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 RUNX3Q13761 415 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 SLC10A6Q3KNW5 377 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 TMEM196Q5HYL7 178 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 DAB2IPQ5VWQ8 1189 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 OVOS1Q6IE37 1185 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 CENPPQ6IPU0 288 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 TTC30AQ86WT1 665 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 DEFB124Q8NES8 71 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 BEST2Q8NFU1 509 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 RPLP0P6Q8NHW5 317 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 ZCCHC14Q8WYQ9 949 aaKnown RBP9.93□□□□□ -0.82
CCDC171-204ENST00000470191 SPOCK2Q92563 424 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 CHFRQ96EP1 664 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 ZC3H10Q96K80 434 aaKnown RBP9.93□□□□□ -0.82
CCDC171-204ENST00000470191 GCNAQ96QF7 691 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 TPSD1Q9BZJ3 242 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 TM6SF1Q9BZW5 370 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 PTPRHQ9HD43 1115 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 HPS4Q9NQG7 708 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 DDX19AQ9NUU7 478 aaKnown RBP9.93□□□□□ -0.82
CCDC171-204ENST00000470191 MAFFQ9ULX9 164 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
CCDC171-204ENST00000470191 AKAP13Q12802 2813 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 CEP192Q8TEP8 1941 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 LNP1A1A4G5 178 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 BCLAF3A2AJT9 711 aaKnown RBP9.92□□□□□ -0.82
CCDC171-204ENST00000470191 OTOL1A6NHN0 477 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-204ENST00000470191 E9PMD0 336 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 M0QZQ0 153 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 PPEF2O14830 753 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 JAK2O60674 1132 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 RHOBTB1O94844 696 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 LARGE1O95461 756 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 OR52Z1P0C646 297 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 NMT1P30419 496 aaKnown RBP9.92□□□□□ -0.82
CCDC171-204ENST00000470191 GALK1P51570 392 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 RING1Q06587 406 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 GPR17Q13304 367 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 DMP1Q13316 513 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-204ENST00000470191 NOLC1Q14978 699 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC171-204ENST00000470191 PTPAQ15257 358 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 MGAT5BQ3V5L5 792 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 SLC39A12Q504Y0 691 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 ARMCX5Q6P1M9 558 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 ITIH5Q86UX2 942 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 MAB21L3Q8N8X9 362 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-204ENST00000470191 STKLD1Q8NE28 680 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 PSMG2Q969U7 264 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 SLC46A2Q9BY10 475 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 TASP1Q9H6P5 420 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 TMEM9BQ9NQ34 198 aa9.92□□□□□ -0.82
CCDC171-204ENST00000470191 OBP2AQ9NY56 170 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms