RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ATF7P17544 494 aaPredicted RBP19.29■□□□□ 0.68
SMC4-211ENST00000469858 PAFAH1B1P43034 410 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 NDST1P52848 882 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 INCA1Q0VD86 236 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 LIN9Q5TKA1 542 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 TMEM35BQ8NCS4 154 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 LPPQ93052 612 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 HES6Q96HZ4 224 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 RPGRIP1Q96KN7 1286 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 AVENQ9NQS1 362 aaPredicted RBP19.29■□□□□ 0.68
SMC4-211ENST00000469858 PCDHGC3Q9UN70 934 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 CEP83Q9Y592 693 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 ALG6Q9Y672 507 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
SMC4-211ENST00000469858 KBTBD13C9JR72 458 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 PTGESO14684 152 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 MED7O43513 233 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 MLH1P40692 756 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 C2orf54Q08AI8 447 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 PPP1R2P3Q6NXS1 205 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 UNC93B1Q9H1C4 597 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 A0A0U1RQG5 324 aaPredicted RBP19.28■□□□□ 0.68
SMC4-211ENST00000469858 PIRO00625 290 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 MGEA5O60502 916 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 CFAP221Q4G0U5 840 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 FAM26DQ5JW98 314 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 TTC39CQ8N584 583 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 GPR161Q8N6U8 529 aaKnown RBP19.28■□□□□ 0.68
SMC4-211ENST00000469858 VCPIP1Q96JH7 1222 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 ZNF560Q96MR9 790 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 MRPL45Q9BRJ2 306 aaKnown RBP19.28■□□□□ 0.68
SMC4-211ENST00000469858 ANAPC7Q9UJX3 599 aa19.28■□□□□ 0.68
SMC4-211ENST00000469858 CKBP12277 381 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 IBSPP21815 317 aaPredicted RBP19.27■□□□□ 0.68
SMC4-211ENST00000469858 MMP8P22894 467 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 TUBB4BP68371 445 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 C1QBPQ07021 282 aaKnown RBP19.27■□□□□ 0.68
SMC4-211ENST00000469858 PTP4A2Q12974 167 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 DENND1BQ6P3S1 775 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 DPH6Q7L8W6 267 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 HEXIM2Q96MH2 286 aaKnown RBP19.27■□□□□ 0.68
SMC4-211ENST00000469858 RPS6KC1Q96S38 1066 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 GAD1Q99259 594 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 FAM124BQ9H5Z6 455 aaPredicted RBP19.27■□□□□ 0.68
SMC4-211ENST00000469858 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
SMC4-211ENST00000469858 RNF14Q9UBS8 474 aa19.27■□□□□ 0.68
SMC4-211ENST00000469858 CES2O00748 559 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 RHOXF2BP0C7M4 288 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 CYP3A5P20815 502 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 COMTP21964 271 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 RNASE9P60153 205 aaKnown RBP19.26■□□□□ 0.67
SMC4-211ENST00000469858 ZNF572Q7Z3I7 529 aaPredicted RBP19.26■□□□□ 0.67
SMC4-211ENST00000469858 WDTC1Q8N5D0 677 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 SLC43A3Q8NBI5 491 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 SPATA4Q8NEY3 305 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 PBKQ96KB5 322 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 PPP1R10Q96QC0 940 aaKnown RBP19.26■□□□□ 0.67
SMC4-211ENST00000469858 RHOXF2Q9BQY4 288 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 NT5C1AQ9BXI3 368 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 ZNF518BQ9C0D4 1074 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 PHF24Q9UPV7 400 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 CEP104O60308 925 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 CAND2O75155 1236 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 CDH5P33151 784 aaPredicted RBP19.26■□□□□ 0.67
SMC4-211ENST00000469858 PNPLA4P41247 253 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 RNF169Q8NCN4 708 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 SELENOOQ9BVL4 669 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 TRIM7Q9C029 511 aa19.26■□□□□ 0.67
SMC4-211ENST00000469858 KPNA7A9QM74 516 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 ARVCFO00192 962 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 SPTLC1O15269 473 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 DDX3YO15523 660 aaKnown RBP19.25■□□□□ 0.67
SMC4-211ENST00000469858 VDRP11473 427 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 TAF6P49848 677 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 AFF1P51825 1210 aaKnown RBP19.25■□□□□ 0.67
SMC4-211ENST00000469858 SGO2Q562F6 1265 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 AGMOQ6ZNB7 445 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 CPNE8Q86YQ8 564 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 USP38Q8NB14 1042 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 GSTCDQ8NEC7 633 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 ADAM2Q99965 735 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 PTPN22Q9Y2R2 807 aa19.25■□□□□ 0.67
SMC4-211ENST00000469858 SPOPO43791 374 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 MICAL2O94851 1124 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 CALB1P05937 261 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 RAB27AP51159 221 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 MAMLD1Q13495 774 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 DSC3Q14574 896 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 SOWAHAQ2M3V2 549 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 SV2CQ496J9 727 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 FBXO38Q6PIJ6 1188 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 ERICH1Q86X53 443 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 LHX5Q9H2C1 402 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 ANKZF1Q9H8Y5 726 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 MRPL47Q9HD33 250 aaKnown RBP19.24■□□□□ 0.67
SMC4-211ENST00000469858 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.24■□□□□ 0.675e-7■■■■□ 23.7
SMC4-211ENST00000469858 GIT1Q9Y2X7 761 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 SCINQ9Y6U3 715 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 TDRD15B5MCY1 1934 aaKnown RBP19.24■□□□□ 0.67
SMC4-211ENST00000469858 ARL5CA6NH57 179 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms