RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 KDM4CQ9H3R0 1056 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 DPP3Q9NY33 737 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 TMX2Q9Y320 296 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 MTSS1O43312 755 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 RGS2P41220 211 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 CUL3Q13618 768 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 SLITRK1Q96PX8 696 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 PRMT1Q99873 361 aaKnown RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 CCDC78A2IDD5 438 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 MDH1P40925 334 aaKnown RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 NAMPTP43490 491 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 MAPRE1Q15691 268 aaKnown RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 SMTNL2Q2TAL5 461 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 SYTL3Q4VX76 610 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 C4orf22Q6V702 233 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 USP38Q8NB14 1042 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 C1orf131Q8NDD1 294 aaKnown RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 ARL8AQ96BM9 186 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 CEP19Q96LK0 163 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 ZC4H2Q9NQZ6 224 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 NSMCE4AQ9NXX6 385 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 SH3BP1Q9Y3L3 701 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 SUPT20HL2P0C7V6 817 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 NCAM1P13591 858 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 MAP4P27816 1152 aaKnown RBP16.49■□□□□ 0.23
BRAT1-204ENST00000469750 ACAD10Q6JQN1 1059 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 CALML6Q8TD86 181 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 ELMO2Q96JJ3 720 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 ADAM33Q9BZ11 813 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 YIPF3Q9GZM5 350 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 ARP10275 920 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 SPRP35270 261 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-204ENST00000469750 MROH8Q9H579 483 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 SMARCAL1Q9NZC9 954 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 ARL2BPQ9Y2Y0 163 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 RSPH10B2B2RC85 870 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 RSPH10BP0C881 870 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 AKT1P31749 480 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 BOLA3Q53S33 107 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 CYP4A22Q5TCH4 519 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 CHSY1Q86X52 802 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 FAM118BQ9BPY3 351 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 SYCE1LA8MT33 242 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 PRPF4O43172 522 aaKnown RBP eCLIP16.49■□□□□ 0.233e-6■■■■□ 20.4
BRAT1-204ENST00000469750 STX3Q13277 289 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 PCSK7Q16549 785 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 COBLL1Q53SF7 1204 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 CD302Q8IX05 232 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-204ENST00000469750 GPRC5CQ9NQ84 441 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 ADARB2Q9NS39 739 aaKnown RBP16.49■□□□□ 0.23
BRAT1-204ENST00000469750 SNX5Q9Y5X3 404 aa16.49■□□□□ 0.23
BRAT1-204ENST00000469750 POLBP06746 335 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 IRF1P10914 325 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 SERPINB4P48594 390 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 ERP44Q9BS26 406 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 KIF17Q9P2E2 1029 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 MEGF6O75095 1541 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 SYF2O95926 243 aaKnown RBP16.48■□□□□ 0.23
BRAT1-204ENST00000469750 ODC1P11926 461 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 CHN1P15882 459 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 KRT4P19013 534 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 MAGEA4P43358 317 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 PTK7Q13308 1070 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 SEC23AQ15436 765 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 LRRC8EQ6NSJ5 796 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 TRIM65Q6PJ69 517 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 ANO5Q75V66 913 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 C4orf33Q8N1A6 199 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 FOPNLQ96NB1 174 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 CXorf56Q9H5V9 222 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 PLAGL2Q9UPG8 496 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 PRG3Q9Y2Y8 225 aaPredicted RBP16.48■□□□□ 0.23
BRAT1-204ENST00000469750 PCDHB7Q9Y5E2 793 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 HARS2P49590 506 aaKnown RBP16.48■□□□□ 0.23
BRAT1-204ENST00000469750 PLEKHH3Q7Z736 793 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 TXNRD3Q86VQ6 643 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 ARHGAP18Q8N392 663 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 C20orf96Q9NUD7 363 aaPredicted RBP16.48■□□□□ 0.23
BRAT1-204ENST00000469750 WARS2Q9UGM6 360 aaKnown RBP16.48■□□□□ 0.23
BRAT1-204ENST00000469750 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
BRAT1-204ENST00000469750 ABCE1P61221 599 aaKnown RBP16.48■□□□□ 0.23
BRAT1-204ENST00000469750 ARHGEF7Q14155 803 aa16.48■□□□□ 0.23
BRAT1-204ENST00000469750 ANGPT2O15123 496 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 ALDH1A3P47895 512 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 ITGA8P53708 1063 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 SH2D3CQ8N5H7 860 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 IPMKQ8NFU5 416 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 TASP1Q9H6P5 420 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 COG4Q9H9E3 785 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 LATS2Q9NRM7 1088 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 PCMTD2Q9NV79 361 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 DBR1Q9UK59 544 aaKnown RBP16.47■□□□□ 0.23
BRAT1-204ENST00000469750 SATB2Q9UPW6 733 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 FAM47DPA6NHR8 397 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 HNRNPCL2B2RXH8 293 aa16.47■□□□□ 0.23
BRAT1-204ENST00000469750 ZNF263O14978 683 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms