RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 HEXIM2Q96MH2 286 aaKnown RBP20.18■□□□□ 0.82
SMC4-209ENST00000468653 TWNKQ96RR1 684 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 ADAM22Q9P0K1 906 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 UVRAGQ9P2Y5 699 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.18■□□□□ 0.827e-44■■■■■ 137.4
SMC4-209ENST00000468653 PCDHGC3Q9UN70 934 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 PACSIN2Q9UNF0 486 aaPredicted RBP20.18■□□□□ 0.82
SMC4-209ENST00000468653 V9GYY5 206 aaPredicted RBP20.18■□□□□ 0.82
SMC4-209ENST00000468653 ARL5CA6NH57 179 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 EFCAB8A8MWE9 144 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 KPNA7A9QM74 516 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 ZNF185O15231 689 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 TADA3O75528 432 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 THP07101 528 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 CXCR5P32302 372 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 CKAP4Q07065 602 aaKnown RBP20.18■□□□□ 0.82
SMC4-209ENST00000468653 SV2CQ496J9 727 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 AGMOQ6ZNB7 445 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 MON1BQ7L1V2 547 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 PHF13Q86YI8 300 aaPredicted RBP20.18■□□□□ 0.82
SMC4-209ENST00000468653 ZNF564Q8TBZ8 553 aaPredicted RBP20.18■□□□□ 0.82
SMC4-209ENST00000468653 VCPIP1Q96JH7 1222 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 C11orf70Q9BRQ4 267 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 NT5C1AQ9BXI3 368 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 ZNF518BQ9C0D4 1074 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 AMFRQ9UKV5 643 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 SCN1AP35498 2009 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 CTAGE15A4D2H0 777 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 MTA2O94776 668 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 CTAGE8P0CG41 777 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 LRPAP1P30533 357 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 PTPROQ16827 1216 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 CTAGE6Q86UF2 777 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 CTAGE4Q8IX94 777 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 FAM126BQ8IXS8 530 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 UBXN4Q92575 508 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 MRPL45Q9BRJ2 306 aaKnown RBP20.17■□□□□ 0.82
SMC4-209ENST00000468653 AVENQ9NQS1 362 aaPredicted RBP20.17■□□□□ 0.82
SMC4-209ENST00000468653 DNAH12Q6ZR08 3092 aa20.17■□□□□ 0.82
SMC4-209ENST00000468653 KIF4AO95239 1232 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 VDRP11473 427 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 SELPP16109 830 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 RRM1P23921 792 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 BFSP2Q13515 415 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 MBTPS1Q14703 1052 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 NAA30Q147X3 362 aaPredicted RBP20.16■□□□□ 0.82
SMC4-209ENST00000468653 MMS22LQ6ZRQ5 1243 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 LRRC8DQ7L1W4 858 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 NT5DC3Q86UY8 548 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 C1orf131Q8NDD1 294 aaKnown RBP20.16■□□□□ 0.82
SMC4-209ENST00000468653 GSTCDQ8NEC7 633 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 COG1Q8WTW3 980 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 RSAD1Q9HA92 442 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 GDAP2Q9NXN4 497 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.16■□□□□ 0.82
SMC4-209ENST00000468653 TMEM110-MUSTN1A8MSY1 372 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 SCNN1GP51170 649 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 C1QBPQ07021 282 aaKnown RBP20.16■□□□□ 0.82
SMC4-209ENST00000468653 SOWAHAQ2M3V2 549 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 C2CD6Q53TS8 623 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 SGO2Q562F6 1265 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 C11orf63Q6NUN7 778 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 DENND1BQ6P3S1 775 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 PHLDB2Q86SQ0 1253 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 OR6B3Q8NGW1 331 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 GOLGA1Q92805 767 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 ABCB6Q9NP58 842 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 UBN1Q9NPG3 1134 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 MIOSQ9NXC5 875 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 KIAA1257Q9ULG3 409 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 STXBP5LQ9Y2K9 1186 aa20.16■□□□□ 0.82
SMC4-209ENST00000468653 SPTLC1O15269 473 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 CDH5P33151 784 aaPredicted RBP20.15■□□□□ 0.82
SMC4-209ENST00000468653 AFF1P51825 1210 aaKnown RBP20.15■□□□□ 0.82
SMC4-209ENST00000468653 MESDQ14696 234 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 CCDC181Q5TID7 509 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 DPH6Q7L8W6 267 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 ECHDC2Q86YB7 292 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 CREG2Q8IUH2 290 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 LHX5Q9H2C1 402 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 TSPYL2Q9H2G4 693 aaPredicted RBP20.15■□□□□ 0.82
SMC4-209ENST00000468653 RGS18Q9NS28 235 aa20.15■□□□□ 0.82
SMC4-209ENST00000468653 HUS1O60921 280 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 CALB1P05937 261 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 MMP8P22894 467 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 LILRA4P59901 499 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 CNGA2Q16280 664 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 ERCC6LQ2NKX8 1250 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 TEX35Q5T0J7 233 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 UNC93AQ86WB7 457 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 APPL2Q8NEU8 664 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 ALG6Q9Y672 507 aa20.14■□□□□ 0.81
SMC4-209ENST00000468653 KCNK3O14649 394 aa20.13■□□□□ 0.81
SMC4-209ENST00000468653 PQBP1O60828 265 aaKnown RBP20.13■□□□□ 0.81
SMC4-209ENST00000468653 PAFAH1B1P43034 410 aa20.13■□□□□ 0.81
SMC4-209ENST00000468653 PTP4A2Q12974 167 aa20.13■□□□□ 0.81
SMC4-209ENST00000468653 ERICH1Q86X53 443 aa20.13■□□□□ 0.81
SMC4-209ENST00000468653 WDTC1Q8N5D0 677 aa20.13■□□□□ 0.81
SMC4-209ENST00000468653 SNX25Q9H3E2 840 aa20.13■□□□□ 0.81
SMC4-209ENST00000468653 MRPL47Q9HD33 250 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms