RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 ARL5CA6NH57 179 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 KBTBD13C9JR72 458 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 RTN2O75298 545 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 CAPN15O75808 1086 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 CYP3A5P20815 502 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 BDNFP23560 247 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 LRPAP1P30533 357 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 YARSP54577 528 aaKnown RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 PAK2Q13177 524 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ORC1Q13415 861 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 SOWAHAQ2M3V2 549 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ZNF677Q86XU0 584 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 MICALL1Q8N3F8 863 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 MYRIPQ8NFW9 859 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 DIS3LQ8TF46 1054 aaKnown RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 KBTBD7Q8WVZ9 684 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 TLR10Q9BXR5 811 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ABCB6Q9NP58 842 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 RGS18Q9NS28 235 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 PARP2Q9UGN5 583 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 CHORDC1Q9UHD1 332 aaPredicted RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 CYTH4Q9UIA0 394 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 STXBP5LQ9Y2K9 1186 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 TET1Q8NFU7 2136 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 INPPL1O15357 1258 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 HCRTO43612 131 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 PALMO75781 387 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 H2AFZP0C0S5 128 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 GNA15P30679 374 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 MLH1P40692 756 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 NOMO3P69849 1222 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 FAM189BP81408 668 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 CENPCQ03188 943 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ZNF394Q53GI3 561 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ZNF667Q5HYK9 610 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 C1QTNF12Q5T7M4 302 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ACAD10Q6JQN1 1059 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 LLGL2Q6P1M3 1020 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 H2AFVQ71UI9 128 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 MON1BQ7L1V2 547 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ANKRD33Q7Z3H0 272 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 LRRC52Q8N7C0 313 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 C3orf58Q8NDZ4 430 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 SLC35G2Q8TBE7 412 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 MRPL45Q9BRJ2 306 aaKnown RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 BEGAINQ9BUH8 593 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 GOLPH3Q9H4A6 298 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 LAMA2P24043 3122 aaKnown RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 TCRBV5S1A1TA0A578 114 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 C9IYK1 514 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 CTIFO43310 598 aaKnown RBP8.8□□□□□ -1
BRCA1-208ENST00000468300 ATMINO43313 823 aaPredicted RBP8.8□□□□□ -1
BRCA1-208ENST00000468300 B4GALT3O60512 393 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 IPO7O95373 1038 aaKnown RBP8.8□□□□□ -1
BRCA1-208ENST00000468300 CYP1A2P05177 515 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 FGFR1P11362 822 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 CDH5P33151 784 aaPredicted RBP8.8□□□□□ -1
BRCA1-208ENST00000468300 HADHBP55084 474 aaKnown RBP8.8□□□□□ -1
BRCA1-208ENST00000468300 USP38Q8NB14 1042 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 CPA5Q8WXQ8 436 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 GAD1Q99259 594 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 ADAM2Q99965 735 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 PAAF1Q9BRP4 392 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 IMPG2Q9BZV3 1241 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 UBQLN1Q9UMX0 589 aaKnown RBP8.8□□□□□ -1
BRCA1-208ENST00000468300 LTBP2Q14767 1821 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 NCK2O43639 380 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 SRGAP2O75044 1071 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 FAAP100Q0VG06 881 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 BIRC2Q13490 618 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 MEI1Q5TIA1 1274 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 SLC39A5Q6ZMH5 540 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 VPS36Q86VN1 386 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 ECHDC2Q86YB7 292 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 ARMC5Q96C12 935 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 NAPGQ99747 312 aaPredicted RBP8.8□□□□□ -1
BRCA1-208ENST00000468300 WNT8AQ9H1J5 351 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 CYP3A43Q9HB55 503 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 GDAP2Q9NXN4 497 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
BRCA1-208ENST00000468300 MTA2O94776 668 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 PFKMP08237 780 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 ABCB4P21439 1286 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 PAX7P23759 505 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 C2CD6Q53TS8 623 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 LRRC8DQ7L1W4 858 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 MCOLN2Q8IZK6 566 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 BEST2Q8NFU1 509 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 TRIM58Q8NG06 486 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 CAGE1Q8TC20 777 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 GIT1Q9Y2X7 761 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 CTAGE9A4FU28 777 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 ITGA4P13612 1032 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 BPIFB4P59827 614 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 LILRA4P59901 499 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 NAA30Q147X3 362 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 ZC3H12AQ5D1E8 599 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms