RNA–Protein interactions for RNA: ENST00000468275.5

APTX-215, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,455 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-215ENST00000468275 VCPIP1Q96JH7 1222 aa12.9□□□□□ -0.34
APTX-215ENST00000468275 JPH2Q9BR39 696 aaPredicted RBP12.9□□□□□ -0.34
APTX-215ENST00000468275 C16orf70Q9BSU1 422 aa12.9□□□□□ -0.34
APTX-215ENST00000468275 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
APTX-215ENST00000468275 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
APTX-215ENST00000468275 MTCH2Q9Y6C9 303 aa12.9□□□□□ -0.34
APTX-215ENST00000468275 SCN10AQ9Y5Y9 1956 aa12.9□□□□□ -0.34
APTX-215ENST00000468275 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 K7ERI5 159 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 FAM189A1O60320 539 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 HSF2BPO75031 334 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 CYP1A1P04798 512 aaPredicted RBP12.89□□□□□ -0.35
APTX-215ENST00000468275 CA3P07451 260 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 CENPCQ03188 943 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 PTP4A2Q12974 167 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 MXD4Q14582 209 aaPredicted RBP12.89□□□□□ -0.35
APTX-215ENST00000468275 SURF1Q15526 300 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 TMEM31Q5JXX7 168 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 DNAAF5Q86Y56 855 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
APTX-215ENST00000468275 TSEN2Q8NCE0 465 aaKnown RBP12.89□□□□□ -0.35
APTX-215ENST00000468275 ALG3Q92685 438 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 SLCO2A1Q92959 643 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 BICD1Q96G01 975 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 FAM213AQ9BRX8 229 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 CERS4Q9HA82 394 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 CTTNBP2NLQ9P2B4 639 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 PCYOX1Q9UHG3 505 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 NFU1Q9UMS0 254 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
APTX-215ENST00000468275 PIEZO1Q92508 2521 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 H3BRB1 525 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 FGGP02679 453 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 MMEP08473 750 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 POU3F3P20264 500 aaPredicted RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 ACO1P21399 889 aaKnown RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 CHRNA3P32297 505 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 TCF7P36402 384 aaPredicted RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 SLC1A1P43005 524 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 SKOR1P84550 965 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 CAPSQ13938 189 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 WDR44Q5JSH3 913 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 UBR7Q8N806 425 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 C7orf31Q8N865 590 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 ZNF564Q8TBZ8 553 aaPredicted RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 ATP8B4Q8TF62 1192 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 FNBP1Q96RU3 617 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 HAPLN2Q9GZV7 340 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 C2orf40Q9H1Z8 148 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 TRMT13Q9NUP7 481 aaKnown RBP12.88□□□□□ -0.35
APTX-215ENST00000468275 GTF2IRD1Q9UHL9 959 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 LCMT1Q9UIC8 334 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
APTX-215ENST00000468275 ZSCAN5CA6NGD5 496 aaPredicted RBP12.87□□□□□ -0.35
APTX-215ENST00000468275 ABLIM1O14639 778 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 PHF2O75151 1096 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 TOM1L1O75674 476 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 HLA-DRAP01903 254 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 ACTN2P35609 894 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 ZNF132P52740 706 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
APTX-215ENST00000468275 WDR49Q8IV35 697 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 KLHL7Q8IXQ5 586 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 PPP1R13LQ8WUF5 828 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 PIK3R5Q8WYR1 880 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 TATDN2Q93075 761 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
APTX-215ENST00000468275 PLVAPQ9BX97 442 aa12.87□□□□□ -0.35
APTX-215ENST00000468275 DDX47Q9H0S4 455 aaKnown RBP12.87□□□□□ -0.35
APTX-215ENST00000468275 SEPT11Q9NVA2 429 aaKnown RBP12.87□□□□□ -0.35
APTX-215ENST00000468275 RBAKQ9NYW8 714 aaPredicted RBP12.87□□□□□ -0.35
APTX-215ENST00000468275 GOLGA6CA6NDK9 693 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
APTX-215ENST00000468275 ZBTB42B2RXF5 422 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 PODXLO00592 558 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 TLL1O43897 1013 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 VNN1O95497 513 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 CLTAP09496 248 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 GOLGA6DP0CG33 693 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 DLATP10515 647 aaKnown RBP12.86□□□□□ -0.35
APTX-215ENST00000468275 ITGA4P13612 1032 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 COMTP21964 271 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 PROZP22891 400 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 FNTAP49354 379 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 DNA2P51530 1060 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 MCL1Q07820 350 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 CUL2Q13617 745 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 CFAP58Q5T655 872 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
APTX-215ENST00000468275 GDF6Q6KF10 455 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms