RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SIX2Q9NPC8 291 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNIP1-202ENST00000468040 FAM207AQ9NSI2 230 aaPredicted RBP16.27■□□□□ 0.2
SNIP1-202ENST00000468040 TIMM13Q9Y5L4 95 aaPredicted RBP16.27■□□□□ 0.2
SNIP1-202ENST00000468040 TSC2P49815 1807 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 GOLGA6L3A6NEY3 463 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 EPOPA6NHQ4 379 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 GABRDO14764 452 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 WEE2P0C1S8 567 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 UCHL3P15374 230 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 DNAJB1P25685 340 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 PCSK1P29120 753 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 CDH8P55286 799 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 INCA1Q0VD86 236 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 MRPL58Q14197 206 aaKnown RBP16.26■□□□□ 0.19
SNIP1-202ENST00000468040 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 PSMD5Q16401 504 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 RRAGAQ7L523 313 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 ARHGEF19Q8IW93 802 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 OR6B3Q8NGW1 331 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 LNX1Q8TBB1 728 aaPredicted RBP16.26■□□□□ 0.19
SNIP1-202ENST00000468040 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 KBTBD7Q8WVZ9 684 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 ARID3AQ99856 593 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 MRPL45Q9BRJ2 306 aaKnown RBP16.26■□□□□ 0.19
SNIP1-202ENST00000468040 SDCBP2Q9H190 292 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 TTYH1Q9H313 450 aaPredicted RBP16.26■□□□□ 0.19
SNIP1-202ENST00000468040 UBE2TQ9NPD8 197 aaPredicted RBP16.26■□□□□ 0.19
SNIP1-202ENST00000468040 CISHQ9NSE2 258 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 DDX43Q9NXZ2 648 aaKnown RBP16.26■□□□□ 0.19
SNIP1-202ENST00000468040 MTRRQ9UBK8 725 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 FBXL5Q9UKA1 691 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 BACE2Q9Y5Z0 518 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 IRAK3Q9Y616 596 aa16.26■□□□□ 0.19
SNIP1-202ENST00000468040 COL4A4P53420 1690 aaPredicted RBP16.26■□□□□ 0.19
SNIP1-202ENST00000468040 VWA8A3KMH1 1905 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 OR6C75A6NL08 312 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 C2CD2LO14523 706 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 FSCN2O14926 492 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 CXCL14O95715 111 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 CD58P19256 250 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
SNIP1-202ENST00000468040 CA8P35219 290 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 GNL1P36915 607 aaPredicted RBP16.25■□□□□ 0.19
SNIP1-202ENST00000468040 PBX1P40424 430 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 RAP1GAPP47736 663 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 KLK7P49862 253 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 ERVFC1P60507 584 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 CAMK1Q14012 370 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 DPY19L2P1Q6NXN4 242 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 PRSS55Q6UWB4 352 aaPredicted RBP16.25■□□□□ 0.19
SNIP1-202ENST00000468040 UNC93AQ86WB7 457 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 MRPL43Q8N983 215 aaKnown RBP16.25■□□□□ 0.19
SNIP1-202ENST00000468040 MRPL38Q96DV4 380 aaKnown RBP16.25■□□□□ 0.19
SNIP1-202ENST00000468040 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 EMILIN2Q9BXX0 1053 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 FNIP2Q9P278 1114 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 BARX2Q9UMQ3 279 aaPredicted RBP16.25■□□□□ 0.19
SNIP1-202ENST00000468040 STXBP5LQ9Y2K9 1186 aa16.25■□□□□ 0.19
SNIP1-202ENST00000468040 ITIH6Q6UXX5 1313 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.24■□□□□ 0.19
SNIP1-202ENST00000468040 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 A8MXQ7 604 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 LILRB3O75022 631 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 APBA1Q02410 837 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 PLPP4Q5VZY2 271 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 IQCEQ6IPM2 695 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 TNIP3Q96KP6 325 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 KREMEN1Q96MU8 473 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 GANQ9H2C0 597 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 RXFP1Q9HBX9 757 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 LMCD1Q9NZU5 365 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 FHOD1Q9Y613 1164 aa16.24■□□□□ 0.19
SNIP1-202ENST00000468040 C2orf71A6NGG8 1288 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 RFXAPO00287 272 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 AP5Z1O43299 807 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 TBC1D4O60343 1298 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 CILPO75339 1184 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 NOL4O94818 638 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 CSPG5O95196 566 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 NDUFV1P49821 464 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 NDST1P52848 882 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 POLR2FP61218 127 aaKnown RBP16.23■□□□□ 0.19
SNIP1-202ENST00000468040 TSPY1Q01534 308 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 GRIN2CQ14957 1233 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 ARHGAP44Q17R89 818 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 FIGNQ5HY92 759 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 SPECC1LQ69YQ0 1117 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 SLC8B1Q6J4K2 584 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 CACNA2D4Q7Z3S7 1137 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 OSTM1Q86WC4 334 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 AUTS2Q8WXX7 1259 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 KAT5Q92993 513 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms