RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 LRRC3Q9BY71 257 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 UNC45AQ9H3U1 944 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 MMP17Q9ULZ9 603 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 HEMK1Q9Y5R4 338 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-204ENST00000467852 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 PRAMEF12O95522 483 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 GJA4P35212 333 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 RIPPLY3P57055 190 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 PTENP60484 403 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 ZNF33AQ06730 810 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 SERINC3Q13530 473 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 NAB2Q15742 525 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 CC2D1AQ6P1N0 951 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-204ENST00000467852 SLC36A4Q6YBV0 504 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 ANO5Q75V66 913 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 CDR2LQ86X02 465 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-204ENST00000467852 DEFB119Q8N690 84 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 RHBDD1Q8TEB9 315 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 EZH1Q92800 747 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-204ENST00000467852 MED8Q96G25 268 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 POLR3CQ9BUI4 534 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-204ENST00000467852 TRIM4Q9C037 500 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 ZDHHC5Q9C0B5 715 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 TASP1Q9H6P5 420 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 FBXL5Q9UKA1 691 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 PAXBP1Q9Y5B6 917 aa12.86□□□□□ -0.35
VPS26A-204ENST00000467852 BRCC3P46736 316 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 CLCNKBP51801 687 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 PDE1AP54750 535 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 TLE3Q04726 772 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 LRCH2Q5VUJ6 765 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 NAIF1Q69YI7 327 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-204ENST00000467852 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 NFXL1Q6ZNB6 911 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 PGBD3Q8N328 593 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 SNIP1Q8TAD8 396 aaKnown RBP12.85□□□□□ -0.35
VPS26A-204ENST00000467852 UROC1Q96N76 676 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 FAM117AQ9C073 453 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 FAM124BQ9H5Z6 455 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-204ENST00000467852 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 PPME1Q9Y570 386 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
VPS26A-204ENST00000467852 A0A1B0GUA9 196 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 SYN3O14994 580 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 MSH4O15457 936 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 CPB1P15086 417 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 ARSAP15289 507 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 GNSP15586 552 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
VPS26A-204ENST00000467852 GABRR2P28476 465 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 RFC5P40937 340 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 SEC13P55735 322 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 NPEPPSP55786 919 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 TFDP1Q14186 410 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 MXD4Q14582 209 aaPredicted RBP12.84□□□□□ -0.35
VPS26A-204ENST00000467852 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 TMPRSS12Q86WS5 348 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 PLPP6Q8IY26 295 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 CPA6Q8N4T0 437 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 FGF11Q92914 225 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 DHX33Q9H6R0 707 aaKnown RBP12.84□□□□□ -0.35
VPS26A-204ENST00000467852 DIAPH3Q9NSV4 1193 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 SUSD2Q9UGT4 822 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 ASB3Q9Y575 518 aa12.84□□□□□ -0.35
VPS26A-204ENST00000467852 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 MARCH6O60337 910 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 RXRAP19793 462 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 PSMC5P62195 406 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 FOXK1P85037 733 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 KCNH2Q12809 1159 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 PDGFRLQ15198 375 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 AMHR2Q16671 573 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 UPP1Q16831 310 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 CCDC157Q569K6 752 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 CD300LGQ6UXG3 332 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 SPACA3Q8IXA5 215 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 RGL4Q8IZJ4 473 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 BAHD1Q8TBE0 780 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-204ENST00000467852 SMG9Q9H0W8 520 aaKnown RBP12.83□□□□□ -0.36
VPS26A-204ENST00000467852 FLNCQ14315 2725 aa12.83□□□□□ -0.36
VPS26A-204ENST00000467852 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
VPS26A-204ENST00000467852 hCG_1984214I3L0E3 225 aa12.82□□□□□ -0.36
VPS26A-204ENST00000467852 TBX3O15119 743 aa12.82□□□□□ -0.36
VPS26A-204ENST00000467852 FLRT2O43155 660 aa12.82□□□□□ -0.36
VPS26A-204ENST00000467852 B4GALT5O43286 388 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms