RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TDGF1P13385 188 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 ACOT2P49753 483 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 CCR3P51677 355 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 KPNA1P52294 538 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 MLLT6P55198 1093 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 FCHO2Q0JRZ9 810 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 ZC2HC1CQ53FD0 456 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 ADALQ6DHV7 355 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 GAREM2Q75VX8 874 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 BRAPQ7Z569 592 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 GPIHBP1Q8IV16 184 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 ARID3BQ8IVW6 561 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 OR10T2Q8NGX3 314 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 LARP4BQ92615 738 aaKnown RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 MSANTD3Q96H12 275 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 FIZ1Q96SL8 496 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 SEPT5Q99719 369 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 ATXN3LQ9H3M9 355 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 HSFX1Q9UBD0 423 aa18.69■□□□□ 0.58
TRIM56-203ENST00000467847 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-203ENST00000467847 ANO9A1A5B4 782 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 SLC38A8A6NNN8 435 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 TISP43B9A030 160 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 DPYSL4O14531 572 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 CYP11A1P05108 521 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 CHRNB1P11230 501 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 GABRR2P28476 465 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 SF3A1Q15459 793 aaKnown RBP18.68■□□□□ 0.58
TRIM56-203ENST00000467847 SLC39A12Q504Y0 691 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 ARHGAP15Q53QZ3 475 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 GPR158Q5T848 1215 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 SLFN12LQ6IEE8 588 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 C1orf228Q6PIY5 440 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 FAM200AQ8TCP9 573 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 LPIN3Q9BQK8 851 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 ASB7Q9H672 318 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 DSEQ9UL01 958 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 C2CD2Q9Y426 696 aa18.68■□□□□ 0.58
TRIM56-203ENST00000467847 PRR5-ARHGAP8B1AHC4 643 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 DDIT3P35638 169 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 SOX9P48436 509 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 TUFMP49411 452 aaKnown RBP18.67■□□□□ 0.58
TRIM56-203ENST00000467847 CDR1P51861 262 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 ATXN1P54253 815 aaKnown RBP18.67■□□□□ 0.58
TRIM56-203ENST00000467847 ARHGAP8P85298 464 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 LMNB2Q03252 620 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 LRRC32Q14392 662 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 VEPH1Q14D04 833 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 ST3GAL2Q16842 350 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 METTL23Q86XA0 190 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 KRI1Q8N9T8 703 aaKnown RBP18.67■□□□□ 0.58
TRIM56-203ENST00000467847 PYM1Q9BRP8 204 aaKnown RBP18.67■□□□□ 0.58
TRIM56-203ENST00000467847 MKNK1Q9BUB5 465 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 ZCWPW1Q9H0M4 648 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 C8orf33Q9H7E9 229 aaPredicted RBP18.67■□□□□ 0.58
TRIM56-203ENST00000467847 GMEB2Q9UKD1 530 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 AGO2Q9UKV8 859 aaKnown RBP18.67■□□□□ 0.58
TRIM56-203ENST00000467847 RAB23Q9ULC3 237 aa18.67■□□□□ 0.58
TRIM56-203ENST00000467847 TPRP12270 2363 aaKnown RBP18.66■□□□□ 0.58
TRIM56-203ENST00000467847 CYB561D2O14569 222 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 CXCL12P48061 93 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 TAF6P49848 677 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 SATB1Q01826 763 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 MGAT5BQ3V5L5 792 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 THEM5Q8N1Q8 247 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 TTC8Q8TAM2 541 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 LRRC3BQ96PB8 259 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 CCSER1Q9C0I3 900 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 ST6GALNAC4Q9H4F1 302 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 DPP3Q9NY33 737 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 USP18Q9UMW8 372 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 STYXL1Q9Y6J8 313 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 KIF26AQ9ULI4 1882 aaPredicted RBP18.66■□□□□ 0.58
TRIM56-203ENST00000467847 ACACBO00763 2458 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 SPTBN2O15020 2390 aa18.66■□□□□ 0.58
TRIM56-203ENST00000467847 SPECC1L-ADORA2AF8WAN1 911 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 ATF6P18850 670 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 TAF12Q16514 161 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 ARHGAP29Q52LW3 1261 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 DYMQ7RTS9 669 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 RALGPS2Q86X27 583 aaPredicted RBP18.65■□□□□ 0.58
TRIM56-203ENST00000467847 SFR1Q86XK3 245 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 SPEM1Q8N4L4 309 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 POMGNT1Q8WZA1 660 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 EPSTI1Q96J88 318 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 ZFYVE19Q96K21 471 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 GCNAQ96QF7 691 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 IKZF4Q9H2S9 585 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 RBM12Q9NTZ6 932 aaKnown RBP18.65■□□□□ 0.58
TRIM56-203ENST00000467847 OBP2AQ9NY56 170 aa18.65■□□□□ 0.58
TRIM56-203ENST00000467847 ZNF638Q14966 1978 aaKnown RBP18.64■□□□□ 0.58
TRIM56-203ENST00000467847 MYBPHLA2RUH7 354 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
TRIM56-203ENST00000467847 PRAMEF12O95522 483 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 CDC25CP30307 473 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 CTHP32929 405 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 CYP4F8P98187 520 aa18.64■□□□□ 0.57
TRIM56-203ENST00000467847 SMARCB1Q12824 385 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms